DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and SPAC869.01

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_595018.1 Gene:SPAC869.01 / 2543104 PomBaseID:SPAC869.01 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:551 Identity:145/551 - (26%)
Similarity:231/551 - (41%) Gaps:104/551 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIKQLTASYSDGQLSPRRVTEDALQDALRWKT-LNAFVRLTPE--QAGQQAQDAEQRYKLRQPIS 69
            :|.||.....:|.|:...:....|...|:... :|..::|.|:  ....:..|......:|.|  
pombe    70 TIDQLQNYMENGILTSTDIVHCYLDRYLQVNPYVNGILQLNPDVLTIASELDDERANGIIRGP-- 132

  Fly    70 DLDGVTIAIKDNFCTKD-VHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFA-MGAG 132
             |.|:...:||||.||| :.||..|..|...:.|.||.|..:|::||||:.|...:.::| |.:.
pombe   133 -LHGIPFIVKDNFATKDKMDTTAGSYALLGSIVPRDAYVVKQLREAGAVLFGHATLSEWADMRSN 196

  Fly   133 TVDSLY----GPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCG 193
            .....|    |.::..::..:|      .||||.|||.:||:.:...|:|::|.||..:||...|
pombe   197 DYSEGYSARGGQSRCPFNLTVN------PGGSSSGSAISVASNMIAFALGTETDGSIIDPAMRNG 255

  Fly   194 VVGLKPTYGLVSRHGLIPLVNSMDVPGIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLHLPE 258
            |||||||.||.||:|:||.....|..|..||:|.|.|.|..::.|.|:.|..|:.|..   ..||
pombe   256 VVGLKPTVGLTSRYGVIPESEHQDTTGPIARTVRDAVYVFQSMWGIDENDIYTLNQTG---KTPE 317

  Fly   259 VG--------QIDLSTVRIGIPKEYHCHGLSAEVLETWSKVADLLECSGASVRQVSLPNT----- 310
            .|        :..|...|.|:|.:.......|:.::...:|...:|.:||.|..    ||     
pombe   318 DGDYMKFLSNKTSLEGARFGLPWKRLWQNAKADEIDRLLEVVKQIEEAGAIVYN----NTNFYNL 378

  Fly   311 -------------AASIFVYTILNQCEVASNMARY-------------DGIEYGHR--ATDERST 347
                         :.:...||:: :.:..:|:..|             |.:||.::  .|:....
pombe   379 DVISNDGWNWELGSVNESEYTVV-KVDFYNNIKSYLSEVKNTEIHSLEDIVEYNNKYMGTEGGKP 442

  Fly   348 EQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKALRVRRLIAEDFARVFDSSAKEERVDI 412
            ..:.|.|..:   |.....:..|..    || :.|::....|||            ::::|.:|.
pombe   443 NIVPAFSSGQ---DGFLASLEWGGV----KN-ETYWQAVEYVRR------------TSQDEGIDY 487

  Fly   413 LLTPTTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMAGIPAVSIPIRLSQAGLPLSLQLMSNSL 477
            .|..|.    |...|...|......:......|.|..||.|.:::||.:...|.|..|.:|.:: 
pombe   488 ALNYTD----PKTNDSFILNGLLVPSGTSITYQQAAKAGYPMITLPIGVKTNGRPFGLGIMHSA- 547

  Fly   478 NEQLLLTVARWIEAQ-VEFDS-LEHSQQYKA 506
                      |.|.| :::.| :|...||||
pombe   548 ----------WQEPQLIKYGSAIEDLLQYKA 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 137/532 (26%)
gatA 18..490 CDD:234572 134/521 (26%)
SPAC869.01NP_595018.1 PRK07488 66..564 CDD:236030 141/545 (26%)
Amidase 70..570 CDD:302749 145/551 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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