DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and faah-5

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001317730.1 Gene:faah-5 / 190325 WormBaseID:WBGene00013226 Length:643 Species:Caenorhabditis elegans


Alignment Length:537 Identity:131/537 - (24%)
Similarity:201/537 - (37%) Gaps:109/537 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQDALRWKTLNAFVRLTP-------------------EQAGQQAQDAEQRYKLRQPISDLDGVTI 76
            |::||:.:..||:..|:.                   ::|...|...:..|: .||...|.|:..
 Worm   100 LREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKEAFTDAARLDDEYR-EQPKPPLFGIPF 163

  Fly    77 AIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSR---LKQAGAVILGKTNMDQFAMGAGTVDSLY 138
            ::|.||.......|..   |...:...:.|.||.   ||..||:....||:.|..:...|.:.:|
 Worm   164 SVKSNFYVTGYEATVG---LASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVY 225

  Fly   139 GPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGL 203
            |.|||.|      |..|..||||||.|:.:|||.....||:|..||.|.||::||:|.||||...
 Worm   226 GTTKNPW------DFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDR 284

  Fly   204 VSRHGLIPLVNSMDVP---------GIFARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLH-LPE 258
            :....:.|     .:|         |.|.|:|.|...:|..|.|..:....:   |::.|. |.:
 Worm   285 LHESEMHP-----GLPGRGRLGYSCGFFTRNVEDQEYLLRLVIGKPEYQQMS---PYSSLSPLLD 341

  Fly   259 VGQIDLSTVRIG-IPKEYHCH---GLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTI 319
            ....|.....|| ...:..|.   .....|.||..|:.:|    |..|::..:.:.......:.:
 Worm   342 TSSDDKRKPVIGWFVDDGFCSVSPSNQRAVEETIGKLKEL----GYEVKEFKVNDIDTKFHSHAV 402

  Fly   320 LNQC--EVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHY 382
            .:..  .|..:...|....||....| |.......|.|   :..|...|.|..:.||....|...
 Worm   403 ADMLFRNVMPDNGEYMSEMYGSEPYD-RYMSHFIRLVR---YKQVFVIRWLAQHVLLPLAQYTPL 463

  Fly   383 FEK-ALRVRRLIAEDFARVFDSSAKEER-------------VDILLTPTTLTEAPLYKDFASLTN 433
            ..| .|.:.:....|.|.|..:..|.:.             :|.|:.|:.:|.|..:|....|| 
 Worm   464 KSKQVLCLGKAYNSDPACVRQNQEKTDSYKMKWIRYWKGLGIDALICPSFITPAQPFKYPVLLT- 527

  Fly   434 RDQCAVQDFCTQPANMAGIPAVSIPI-------------------RLSQA------GLPLSLQLM 473
                 ...|.|...||...|:..:|:                   :|..|      |:|.|:|::
 Worm   528 -----TGAFITGLFNMLDCPSAVVPVAPVREKENDKFETNGDFVLKLQAAAIKETSGMPNSVQIV 587

  Fly   474 SNSLNEQLLLTVARWIE 490
            :....|::.|.|.|.:|
 Worm   588 ALPNQEEMCLKVMRIVE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 131/537 (24%)
gatA 18..490 CDD:234572 130/535 (24%)
faah-5NP_001317730.1 Amidase 114..597 CDD:388496 122/514 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.729574 Normalized mean entropy S1380
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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