DRSC/TRiP Functional Genomics Resources

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Protein Alignment GatA and Y41D4A.6

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001294547.1 Gene:Y41D4A.6 / 176982 WormBaseID:WBGene00021508 Length:454 Species:Caenorhabditis elegans


Alignment Length:472 Identity:191/472 - (40%)
Similarity:292/472 - (61%) Gaps:30/472 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EDALQDALRWKTLNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCA 92
            |.:::.|:::::...|:..|.|.|.|||::|.:        :.|:...||:||.|.|....||||
 Worm     5 ESSIEKAVKYRSHGIFITETFELARQQAKNALK--------NGLNPFPIAVKDCFLTNGTSTTCA 61

  Fly    93 SRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIA 157
            |:||:.:.||.:||:..|:...|..|:||||:|:|.||..:....:||.|:..:|....:.|.|.
 Worm    62 SQMLEKYTPPVNATIVERIVARGGCIIGKTNLDEFCMGTSSALGHFGPVKSDLTEPGGTEDWTIP 126

  Fly   158 GGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYGLVSRHGLIPLVNSMDVPGIF 222
            ||||||||.||..|:...|:||||||||||||::.|:.|.|||||::||:||||||||:|.|.||
 Worm   127 GGSSGGSAVAVQTGIADFALGSDTGGSTRNPAAFNGIFGFKPTYGVLSRNGLIPLVNSLDAPSIF 191

  Fly   223 ARSVSDCVAVLNTVAGPDKLDSTTIRQPFTRLHLPE-VGQIDLSTVRIGIPKEYHCHGLSAEVLE 286
            |::...|..:|....|.||.|||::       .||| .|...|..::||||.|||...|:.:...
 Worm   192 AKTAQKCWELLELSKGIDKNDSTSV-------ELPEKAGISSLEGLKIGIPVEYHNECLTEDAWR 249

  Fly   287 TWSKVADLLECSGAS-VRQVSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQL 350
            .|::|..||:..||: :..::||.|..|:..|:::...:|||||||||.:.||||::.:.||.::
 Worm   250 HWNRVTGLLKSRGAAEIHVLNLPTTRFSLACYSVIAAADVASNMARYDSVAYGHRSSSDSSTYEM 314

  Fly   351 YALSRAEGFNDVVKTRILTGNFLLLKK-NY-DHYFEKALRVRRLIAEDFARVFDSSAKEERVDIL 413
            ||.||:|..|.:|:.||..||:.|:|: .| ..|||:||:|||:|.::..:.|      ..||::
 Worm   315 YASSRSEALNTIVRRRIFAGNYFLMKQWGYRQKYFERALKVRRIIHDELRQAF------REVDLI 373

  Fly   414 LTPTTLTEAPLYKDFAS--LTNRDQCAVQDFCTQPANMAGIPAVSIPIRLSQAGLPLSLQLMSNS 476
            :|||....||.|.:...  .:..|.   .|:.||.||:||||::|:|:.:::.|||:.:|||::.
 Worm   374 VTPTASGTAPKYSELRDTLFSKEDN---DDYFTQAANLAGIPSISVPVGVAEDGLPIGVQLMADK 435

  Fly   477 LNEQLLLTVARWIEAQV 493
            |.::.:..||..::..:
 Worm   436 LQDRAVCDVAHILDGLI 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 191/468 (41%)
gatA 18..490 CDD:234572 191/467 (41%)
Y41D4A.6NP_001294547.1 gatA 20..448 CDD:234572 189/451 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162204
Domainoid 1 1.000 342 1.000 Domainoid score I573
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6699
Inparanoid 1 1.050 352 1.000 Inparanoid score I1332
Isobase 1 0.950 - 0.729574 Normalized mean entropy S1380
OMA 1 1.010 - - QHG60965
OrthoDB 1 1.010 - - D1195292at2759
OrthoFinder 1 1.000 - - FOG0004263
OrthoInspector 1 1.000 - - oto19515
orthoMCL 1 0.900 - - OOG6_101205
Panther 1 1.100 - - LDO PTHR11895
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R473
SonicParanoid 1 1.000 - - X3001
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.850

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