DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and Faah

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_034303.3 Gene:Faah / 14073 MGIID:109609 Length:579 Species:Mus musculus


Alignment Length:554 Identity:127/554 - (22%)
Similarity:195/554 - (35%) Gaps:139/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QLTASYSDGQLSPRRVTEDALQDALRW---KTLNAFVRLTPEQAGQQAQDAEQRYKLRQPISDLD 72
            ||......|:|||..|....|..|  |   |..|.......:...|.:|...|..        |.
Mouse    81 QLVQKLQSGELSPEAVLFTYLGKA--WEVNKGTNCVTSYLTDCETQLSQAPRQGL--------LY 135

  Fly    73 GVTIAIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTNMDQFAMGAGTVDSL 137
            ||.:::|:.|..|...:|....:.:......|..|...||..|||....||:.|..:.....:.|
Mouse   136 GVPVSLKECFSYKGHASTLGLSLNEGVTSESDCVVVQVLKLQGAVPFVHTNVPQSMLSYDCSNPL 200

  Fly   138 YGPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPASYCGVVGLKPTYG 202
            :|.|.|.|...      :..||||||..:.:.:|.....:|:|.|||.|.|:::||:.|||||..
Mouse   201 FGQTMNPWKPS------KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259

  Fly   203 LVSRHGLIPLVNSMDV----PGIFARSVSDCVAVLNTVAGPD--KLDSTTIRQPFT----RLHLP 257
            .:|:.||...|.....    .|..||.|......:..:...|  :||||....||.    |...|
Mouse   260 RLSKSGLKSCVYGQTAVQLSVGPMARDVDSLALCMKALLCEDLFRLDSTIPPLPFREEIYRSSRP 324

  Fly   258 -EVGQIDLSTVRIGIPKEYHCHGLSAEVLETWSKVADLLECSGASVRQVSLPNTAASIFVYTILN 321
             .||..:.....:..|      .:...|:||    ...||.:|.::... |||...  :...:|:
Mouse   325 LRVGYYETDNYTMPTP------AMRRAVMET----KQSLEAAGHTLVPF-LPNNIP--YALEVLS 376

  Fly   322 QCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGFNDVVKTRILTGNFLLLKKNYDHYFEKA 386
                |..:....|..:               |...:|  |.|...:  |:.:|:.| ...:|:|.
Mouse   377 ----AGGLFSDGGCSF---------------LQNFKG--DFVDPCL--GDLVLVLK-LPRWFKKL 417

  Fly   387 LR------VRRLIA--------------------EDFARVFDSSAKEERVDILLTPT-------- 417
            |.      ..||.|                    |.:.:...:..|...:|::|||.        
Mouse   418 LSFLLKPLFPRLAAFLNSMCPRSAEKLWELQHEIEMYRQSVIAQWKAMNLDVVLTPMLGPALDLN 482

  Fly   418 -------TLTEAPLYK--DF-------ASLTNRDQCAVQ----------DFCTQPANMAGIPAVS 456
                   .::...||.  ||       .::|..|...::          |...:.....||    
Mouse   483 TPGRATGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMEHYKGYFGDMWDNILKKGMKKGI---- 543

  Fly   457 IPIRLSQAGLPLSLQLMSNSLNEQLLLTVARWIE 490
                    |||:::|.::....|:|.|...|.:|
Mouse   544 --------GLPVAVQCVALPWQEELCLRFMREVE 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 127/554 (23%)
gatA 18..490 CDD:234572 124/545 (23%)
FaahNP_034303.3 Amidase 95..562 CDD:279733 118/531 (22%)
Substrate binding. /evidence=ECO:0000250 238..241 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0154
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.