DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GatA and faah.3

DIOPT Version :9

Sequence 1:NP_650775.2 Gene:GatA / 42283 FlyBaseID:FBgn0260779 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_012817414.2 Gene:faah.3 / 100145539 XenbaseID:XB-GENE-997956 Length:588 Species:Xenopus tropicalis


Alignment Length:593 Identity:143/593 - (24%)
Similarity:221/593 - (37%) Gaps:169/593 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RRHLQWSIKQLTASYSDGQLSPRRV----TEDALQDALRWKTLNAFVRLTPEQAGQQAQDAE--- 59
            ||.|..|:::||....||.|||..|    .:.||:.......:..|:           .|.|   
 Frog    77 RRILSMSLQELTEKLRDGSLSPESVLYPYVKKALEVTRDTNCITVFM-----------NDCETQL 130

  Fly    60 QRYKLRQPISDLDGVTIAIKDNFCTKDVHTTCASRMLQDFVPPYDATVCSRLKQAGAVILGKTNM 124
            |..|.::....|.||.::||::...:...:||......|.:...|:.:...||:.||:|..|||:
 Frog   131 QEVKKQKQKGLLYGVPVSIKEHVGYQGHPSTCGLVQYLDELEEEDSVIVKVLKKQGAIIFAKTNV 195

  Fly   125 DQFAMGAGTVDSLYGPTKNIWSEDLNKDHWRIAGGSSGGSASAVAAGLCYAAIGSDTGGSTRNPA 189
            .|..:...|.:.:||.|.|      ..:|.:.|.|||||..:.:..|......|:|.|||.|.|:
 Frog   196 PQTLICYETSNPIYGLTTN------PHNHTKGAAGSSGGEGALIGGGGSILGFGTDIGGSIRLPS 254

  Fly   190 SYCGVVGLKPTYGLVSRHGLIPLVNSMDVP----GIFARSVSDCVAVLNTVAGPD--KLDSTTIR 248
            |:||:.|||||...:|.||:.|.|:.|...    |..||.|...|..:..:...:  |||.....
 Frog   255 SFCGIAGLKPTPNRLSLHGVRPCVDGMLAVLLCIGPMARDVDSLVLCMKALLCDEMFKLDPRVPP 319

  Fly   249 QPFTRLHLPEVGQIDLST---VRIGIPKEYHCHG-------LSAEVLETWSKVADLLECSGASVR 303
            .||..    ||    .||   :|||.   |...|       :....|||    ..|||.:|..:.
 Frog   320 LPFNE----EV----YSTSQPLRIGY---YETDGYTLPNPAMRRVFLET----KKLLEEAGHMLI 369

  Fly   304 QVSLPNTAASIFVYTILNQCEVASNMARYDGIEYGHRATDERSTEQLYALSRAEGF-NDVVKTRI 367
            ....|.|.      .:||:..:.|...  ||                 ..:.:|.| |::|..|:
 Frog   370 PFKPPRTE------YMLNELYMKSLFG--DG-----------------GQTLSEKFKNNIVDQRL 409

  Fly   368 ----LTGNFLLLKKNYDHYFEKALRVRRLIA--------------------EDFARVFDSSAKEE 408
                |..|...:.|....:..|.||.|..::                    |::...|.:..::.
 Frog   410 RDLCLLCNLPKIVKKILAFILKPLRPRYALSLSSAQGASCVKDHWKQNTAVEEYQTEFIAEWRKL 474

  Fly   409 RVDILLT-----------PTTLTEAPLYKDFASLTNRDQCAVQDFCTQPANMAGIPAVSIPI-RL 461
            .:|::|.           |..|..|..|                  |...|:.|.||..:|: .:
 Frog   475 NLDVVLAPMLGPAFNPGYPAKLLSAASY------------------TMLYNLVGFPAGVVPVGSV 521

  Fly   462 SQA----------------------------GLPLSLQLMSNSLNEQLLLTVARWIEAQVEFDSL 498
            :|.                            |||||:|..:....::|.|.:.:      |.::|
 Frog   522 TQTDEEELKNYKGHFNDQLDKLFVKAVEGGLGLPLSVQCAALPYQDELCLRLMK------EVETL 580

  Fly   499 EHSQQYKA 506
            ..:::.||
 Frog   581 HQNKKKKA 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GatANP_650775.2 PRK07488 8..491 CDD:236030 136/570 (24%)
gatA 18..490 CDD:234572 133/559 (24%)
faah.3XP_012817414.2 Amidase 99..571 CDD:418511 127/546 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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