DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6005 and sorf-1

DIOPT Version :10

Sequence 1:NP_650771.1 Gene:CG6005 / 42279 FlyBaseID:FBgn0038672 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_508584.3 Gene:sorf-1 / 180626 WormBaseID:WBGene00022769 Length:239 Species:Caenorhabditis elegans


Alignment Length:308 Identity:58/308 - (18%)
Similarity:92/308 - (29%) Gaps:108/308 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 PVTPEPVET--PRI--------------------------GPSPRRFVPASAIPDLRAANAAARS 327
            ||||..|||  |.:                          ..|||.      :.|.....:.|||
 Worm     5 PVTPAAVETYDPDVDHDDESNGLDGFRVRSKRSGKFSGGYSDSPRE------VGDGYGVRSRARS 63

  Fly   328 SM-------------HNRNR----PRMYNPPPAV------------------------------- 344
            :|             |:...    .|.||..|.|                               
 Worm    64 NMKMYGGFKSEFDSDHDSGSGFGLKRKYNGNPKVSADFDADSDDEIVLVPKATRLRTHGKPSSGD 128

  Fly   345 -SHSQG---PSRSVSRMSQDSLFYS---RPASIALQRRSMDQ-----DSVTDFQTIRQGF----E 393
             ||..|   |.:|..    |..|.|   :|.:.:....:..|     |...|.:..|:||    :
 Worm   129 FSHGSGGGFPLKSFG----DRNFASHGFKPKNFSKPEPNFSQDLDYDDEFDDDRAEREGFNPRIQ 189

  Fly   394 NQAGTAQLNRY---DGSV---TASVRLAMEEKRRKHDQQMAQMSFSSANETERLEKSKAAFFALR 452
            :...::::|.|   |||.   |.:........|.||:|..|.....|....|.:...|.......
 Worm   190 SSRSSSRVNGYSRKDGSYPRNTGASNGYGSSSRFKHEQMNAAAEVESDPIDEVVSSVKMLTEMFV 254

  Fly   453 KNDNDQTSKGKEEWYDHFEAKLRALELRVGLEEGEDGTQSARLNRASS 500
            :.:|.:....:|......|.:|:..::.:..::...|..:..|:...|
 Worm   255 RVENSKMEMMREMEKSRMEMELKHCQMMLESQQQIIGAFAEALSEKKS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6005NP_650771.1 CFAP61_N 84..>175 CDD:465016
sorf-1NP_508584.3 None
Blue background indicates that the domain is not in the aligned region.

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