powered by:
Protein Alignment snRNP-U1-C and AT4G03120
DIOPT Version :9
Sequence 1: | NP_650767.1 |
Gene: | snRNP-U1-C / 42274 |
FlyBaseID: | FBgn0261792 |
Length: | 145 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_567250.1 |
Gene: | AT4G03120 / 828071 |
AraportID: | AT4G03120 |
Length: | 207 |
Species: | Arabidopsis thaliana |
Alignment Length: | 194 |
Identity: | 74/194 - (38%) |
Similarity: | 88/194 - (45%) |
Gaps: | 53/194 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID-------ATTAAF- 57
||:|||||||||||||||||||.|..|.||:.||:.|||::.|:|.|.||| ..|..:
plant 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQTGGYQ 65
Fly 58 KAGKITNN--------PFAGGPGGAP--------PKPAGVSIPP----PNMGAPPRPGMPGMPYM 102
:.|.:.|. |....||..| |:| .:|| |..|.|.....||.|..
plant 66 QVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRP---MMPPQGYMPPPGVPQMMAPPGAPLP 127
Fly 103 PPLMNPMM---GMRP-------PPIMNPMAMMG-----------PPPPLGTIPGVRP-GIMNGP 144
||..|.:: ||.| ||.|.|:...| ||||..|.|...| |..|.|
plant 128 PPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNGLPPPPPYHTNPAAPPSGNFNNP 191
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
snRNP-U1-C | NP_650767.1 |
zf-U1 |
1..38 |
CDD:368798 |
27/36 (75%) |
AT4G03120 | NP_567250.1 |
zf-U1 |
1..38 |
CDD:368798 |
27/36 (75%) |
Information from Original Tools:
Return to query results.
Submit another query.