DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment snRNP-U1-C and snrpc

DIOPT Version :9

Sequence 1:	NP_650767.1	Gene:	snRNP-U1-C / 42274	FlyBaseID:	FBgn0261792	Length:	145	Species:	Drosophila melanogaster
Sequence 2:	NP_001016598.1	Gene:	snrpc / 549352	XenbaseID:	XB-GENE-495092	Length:	159	Species:	Xenopus tropicalis

Alignment Length:	154	Identity:	92/154 - (59%)
Similarity:	103/154 - (66%)	Gaps:	28/154 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAGKITNN 65
            |||:|||||||||||||||||||||:||||::|||.|||||||||||.|||.|||||:.|||...
Frog     1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPT 65

  Fly    66 PFAGGPGGAPPKPAGVSIPPPNMGAPPRPGMPGMPYMPPLMNPMMGMRPPPIMNPMAMMGPPP-- 128
            |||..|.|:...|     |||:||.||||||  || .||:..|.|          |.||||||
Frog    66 PFAAPPAGSAMIP-----PPPSMGGPPRPGM--MP-APPMAGPPM----------MPMMGPPPPG 112

  Fly   129 --PLGTIPGVRP------GIMNGP 144
              |:|..||:||      .:|.||
Frog   113 MMPVGHGPGMRPPMGAHMPMMPGP 136

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-C	NP_650767.1	zf-U1	1..38	CDD:368798	31/36 (86%)
snrpc	NP_001016598.1	zf-U1	1..38	CDD:368798	31/36 (86%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	63..95		19/39 (49%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	139..159
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	96	1.000	Domainoid score	I7207
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	175	1.000	Inparanoid score	I3945
OMA	1	1.010	-	-		QHG53368
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003605
OrthoInspector	1	1.000	-	-		otm48741
Panther	1	1.100	-	-	LDO	PTHR31148
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1268
SonicParanoid	1	1.000	-	-		X2482
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	10.100