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Protein Alignment snRNP-U1-C and Zmat5
DIOPT Version :10
| Sequence 1: | NP_650767.1 |
Gene: | snRNP-U1-C / 42274 |
FlyBaseID: | FBgn0261792 |
Length: | 145 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_063129576.1 |
Gene: | Zmat5 / 501926 |
RGDID: | 1559774 |
Length: | 233 |
Species: | Rattus norvegicus |
| Alignment Length: | 44 |
Identity: | 15/44 - (34%) |
| Similarity: | 22/44 - (50%) |
Gaps: | 1/44 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 KYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQA 46
:|:|||||... .|:...||.|..|.:|....|.:|..:.:..|
Rat 4 RYFCDYCDRSF-QDNLHNRKKHLNGLQHLKAKKVWYDMFRDAAA 46
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| snRNP-U1-C | NP_650767.1 |
zf-U1 |
1..38 |
CDD:368798 |
13/34 (38%) |
| Zmat5 | XP_063129576.1 |
None |
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