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Protein Alignment snRNP-U1-C and usp103
DIOPT Version :9
Sequence 1: | NP_650767.1 |
Gene: | snRNP-U1-C / 42274 |
FlyBaseID: | FBgn0261792 |
Length: | 145 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_595384.1 |
Gene: | usp103 / 2541289 |
PomBaseID: | SPBP35G2.09 |
Length: | 182 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 140 |
Identity: | 51/140 - (36%) |
Similarity: | 66/140 - (47%) |
Gaps: | 25/140 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLID--ATTAAFKAGKIT 63
||:|.||||..:|||||.||||.|..||.|..||:.||.|..:|:||..:: |::...|.|
pombe 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEERASSGFLKKG--- 62
Fly 64 NNPFAGGPGGAPPKPAGVSIPPP----NMGAPPRPG-MPGMPYMPPL-MNPMMGMRPPPIM---- 118
.|:...|...:.||. |:|.||.|. :....||.|. ||.|......|:|
pombe 63 --------NGSLDLPYAYAFPPKYNVFNLGCPPPPYIVSANTYMAPKGMNAMNAAAFVPMMPAVN 119
Fly 119 --NPMAMMGP 126
|.:|...|
pombe 120 LTNQVAFSAP 129
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
1 |
1.000 |
58 |
1.000 |
Domainoid score |
I3100 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5136 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
73 |
1.000 |
Inparanoid score |
I1908 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003605 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto101438 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_102948 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR31148 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1268 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X2482 |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
11 | 10.850 |
|
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