Protein Alignment snRNP-U1-C and snRNP-U1-C

DIOPT Version :10

• Sequence 1: NP_650767.1
• Gene: snRNP-U1-C / 42274
• FlyBaseID: FBgn0261792
• Length: 145
• Species: Drosophila melanogaster
• Sequence 2: XP_321527.3
• Gene: snRNP-U1-C / 1281588
• VectorBaseID: AGAMI1_008289
• Length: 183
• Species: Anopheles gambiae
• Alignment Length: 152
• Identity: 106/152 - (69%)
• Similarity: 115/152 - (75%)
• Gaps: 20/152 - (13%)

  Fly     1 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHRDNVKFYYQKWMEEQAQHLIDATTAAFKAGKITNN 65
            ||||||||||||||||||||||||||||||:|||||||||||||||||||||||||:|||||..|
Mosquito    32 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAYKAGKIAPN 96

  Fly    66 PFAGGPGGAPPKPAGVSIPPPNMGAPPRPGM-PGMPY-MPPLM--------NPMMGMRPPPIMNP 120
            ||..|    |||| .:|||||.|..|||||| ||||. .|||:        .|||||||||:|.|
Mosquito    97 PFTAG----PPKP-NISIPPPTMNMPPRPGMIPGMPAGAPPLLMGPNGPLPPPMMGMRPPPMMVP 156

  Fly   121 MAMMGPPPPLGTIPGVRPGIMN 142
            ...|   ||:|.  |:||.:|:
Mosquito   157 TMGM---PPMGL--GMRPPVMS 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snRNP-U1-C	NP_650767.1	zf-U1	1..38	CDD:368798	35/36 (97%)
snRNP-U1-C	XP_321527.3	None