DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42613 and PCOLCE

DIOPT Version :10

Sequence 1:NP_001247185.1 Gene:CG42613 / 42269 FlyBaseID:FBgn0261262 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_002584.2 Gene:PCOLCE / 5118 HGNCID:8738 Length:449 Species:Homo sapiens


Alignment Length:459 Identity:109/459 - (23%)
Similarity:168/459 - (36%) Gaps:122/459 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   719 GELNSPRYPSNYPSDTNCSYLFLAEADEQVTIVFDHFKIKADNNANATAGAYGSGACFEDWLEMY 783
            |.:.|..:|:.||.:..|.:.......:.|::.|..|.::.            ..||..|.||::
Human    46 GYVASEGFPNLYPPNKECIWTITVPEGQTVSLSFRVFDLEL------------HPACRYDALEVF 98

  Fly   784 VVYRDNNDRLLGRYCGQTAPGPVESPRGAVGLRITLHTDQESVASGFKARYFFESAKSDAGD--- 845
            .....:..| |||:||...|.|:.:|...|.||:|  ||:.:...||...|   |.::.:|.   
Human    99 AGSGTSGQR-LGRFCGTFRPAPLVAPGNQVTLRMT--TDEGTGGRGFLLWY---SGRATSGTEHQ 157

  Fly   846 -CGGNFSNQDSGLITSPNWPAGYKAPGRGMASNACNWVMKARPGYKLSIHFEQFGLEGDPANRGC 909
             |||.. .:..|.:|:||||.....||     .:|:|.:.|.|...:::.||:|.||.|...|..
Human   158 FCGGRL-EKAQGTLTTPNWPESDYPPG-----ISCSWHIIAPPDQVIALTFEKFDLEPDTYCRYD 216

  Fly   910 PAAVLRLWMNVDSDQPPLELCGEKPPVEQWHYTSTGQTARISFTTSDKTVGAQGFRIVW------ 968
            ..:|....::.||.:.. :.||:..|   ...:|.|....:.| .||.:|.|.||...:      
Human   217 SVSVFNGAVSDDSRRLG-KFCGDAVP---GSISSEGNELLVQF-VSDLSVTADGFSASYKTLPRG 276

  Fly   969 TEIQDSGPGP-----PSVGLHCESTYHFQCGAGYCISDKLRCDGVKNCGPGDDTDELHCTTEAAE 1028
            |..:..||||     |.|.|..:|.                        |.:.|:|.....:|. 
Human   277 TAKEGQGPGPKRGTEPKVKLPPKSQ------------------------PPEKTEESPSAPDAP- 316

  Fly  1029 EDYDVLIIITLLVVSSLICLLCILCHSRRSRRNHVRQLGLHRNAHYDSQTSATAGLSSSRRHLQS 1093
                                   .|..:      .|:.|..::....|....||.:.|..|....
Human   317 -----------------------TCPKQ------CRRTGTLQSNFCASSLVVTATVKSMVREPGE 352

  Fly  1094 GGASIAGSLHGINSGNLIIPPAPLPPTS------VP----PPPHICIAGVDMGMGMGMGHGLMSN 1148
            |.|.....:....:|.|.:|.   |||.      ||    ||           |..|:.:.||..
Human   353 GLAVTVSLIGAYKTGGLDLPS---PPTGASLKFYVPCKQCPP-----------MKKGVSYLLMGQ 403

  Fly  1149 GEDD 1152
            .|::
Human   404 VEEN 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42613NP_001247185.1 CUB 277..404 CDD:238001
CUB 421..541 CDD:238001
CUB 564..691 CDD:238001
CUB 707..836 CDD:238001 32/116 (28%)
CUB 846..969 CDD:238001 37/128 (29%)
LDLa 987..1022 CDD:238060 4/34 (12%)
PCOLCENP_002584.2 CUB 37..147 CDD:238001 32/118 (27%)
CUB 159..270 CDD:238001 37/121 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..321 14/97 (14%)
NTR_PCOLCE 313..437 CDD:239631 26/139 (19%)
Blue background indicates that the domain is not in the aligned region.

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