DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and Gns

DIOPT Version :10

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_083640.1 Gene:Gns / 75612 MGIID:1922862 Length:544 Species:Mus musculus


Alignment Length:563 Identity:121/563 - (21%)
Similarity:215/563 - (38%) Gaps:184/563 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IFTLWLIAGC-----SAGPQNVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVS 66
            :..|.|:.||     :|...||||||.||...|.|. :....:|..|  :.::|:.|::|:...:
Mouse    20 LLLLPLLGGCLGLVGAARRPNVLLLLTDDQDAELGG-MTPLKKTKAL--IGEKGMTFSSAYVPSA 81

  Fly    67 SCSPSRSQLLTGQAGHSSGMYGLHQGVHN----------FNVLPDTGSLPNLIRDQSG------G 115
            .|.|||:.:|||:..|:      |..|:|          :..:.:..:.|.:::...|      |
Mouse    82 LCCPSRASILTGKYPHN------HHVVNNTLEGNCSSKAWQKIQEPYTFPAILKSVCGYQTFFAG 140

  Fly   116 RIL-------SGIIGKKHVGAANNFRFDFEQTEEQH----SINQIGRNITRMKEYARQFLKQA-- 167
            :.|       :|  |.:|:....::.:..|:..:.:    |||  |:.....:.|:..:|...  
Mouse   141 KYLNEYGAPDAG--GLEHIPLGWSYWYALEKNSKYYNYTLSIN--GKARKHGENYSVDYLTDVLA 201

  Fly   168 ---------KDEKKPFFLMVGFHDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNL 223
                     |...:|||:|:....||......||:.:                       .::|:
Mouse   202 NLSLDFLDYKSNSEPFFMMISTPAPHSPWTAAPQYQK-----------------------AFQNV 243

  Fly   224 DVPA------------WL------PDT--------DVVRQELAAQYMTISRLDQGVGLMLKELEA 262
            ..|.            ||      |.|        |..|:    ::.|:..:|..|..::|.|::
Mouse   244 IAPRNKNFNIHGTNKHWLIRQAKTPMTNSSIRFLDDAFRR----RWQTLLSVDDLVEKLVKRLDS 304

  Fly   263 AGVADQTLVIYTSDNGP-----PFPGGRTNLYEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIY 322
            .|..|.|.:.||||||.     ..|..:..|||..|:.||::..|.  .:.::.:..:||.:|:.
Mouse   305 TGELDNTYIFYTSDNGYHTGQFSLPIDKRQLYEFDIKVPLLVRGPG--IKPNQTSKMLVSNIDLG 367

  Fly   323 PSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIH 387
            |:::|...... |.|::.|.|:||:|:.:                           ||..::...
Mouse   368 PTILDLAGYDL-NKTQMDGMSLLPILKGD---------------------------RNLTWRSDV 404

  Fly   388 NINYWAD-------------------FP--IDQDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQ 431
            .:.|..:                   ||  :.:|.|.: |:     |.:|..:..|.   |||.:
Mouse   405 LVEYQGEGRNVTDPTCPSLSPGVSQCFPDCVCEDAYNN-TY-----ACVRTLSSLWN---LQYCE 460

  Fly   432 RPEW----ELYDIKTDPLERFNLADK------AKYNGTLKQLR 464
            ..:.    |:|:|..||.:..|:|..      .|.|..|..|:
Mouse   461 FDDQEVFVEVYNITADPDQITNIAKSIDPELLGKMNYRLMMLQ 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 SGSH 22..471 CDD:293751 116/543 (21%)
GnsNP_083640.1 G6S 38..487 CDD:293766 112/527 (21%)

Return to query results.
Submit another query.