DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and Arsg

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001348904.1 Gene:Arsg / 74008 MGIID:1921258 Length:525 Species:Mus musculus


Alignment Length:539 Identity:121/539 - (22%)
Similarity:196/539 - (36%) Gaps:190/539 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQFLQWIFTL--WLIAGCSAGPQ-NVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNA 61
            |.|..:.:.|  :.|:|.:..|| |::::||||.|: :.||...:...|.|||.:|..|:.|.:.
Mouse    13 MAFSGFFYPLVDFSISGKTRAPQPNIVIILADDMGWGDLGANWAETKDTTNLDKMASEGMRFVDF 77

  Fly    62 FTSVSSCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNVLPDTGSLP-------NLIRDQSGGRILS 119
            ..:.|:|||||:.||||:.|..:|:      .|||.| ...|.||       .::|.:.   .::
Mouse    78 HAAASTCSPSRASLLTGRLGLRNGV------THNFAV-TSVGGLPVNETTLAEVLRQEG---YVT 132

  Fly   120 GIIGKKHVGAANNFRFDFEQTEEQHSI---NQIG----------------------RNITR---- 155
            .:|||.|:|...::..:|...:....|   |.:|                      ||..|    
Mouse   133 AMIGKWHLGHHGSYHPNFRGFDYYFGIPYSNDMGCTDAPGYNYPPCPACPQRDGLWRNPGRDCYT 197

  Fly   156 ----------------------MKEYAR---QFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFGE 195
                                  .::||.   :|::||....:||.|.||....|....:||....
Mouse   198 DVALPLYENLNIVEQPVNLSGLAQKYAERAVEFIEQASTSGRPFLLYVGLAHMHVPLSVTPPLAH 262

  Fly   196 FCERWGSGEEGMGSIPDWKPIYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKEL 260
                           |..:.:|                         ..::..:|..|| .:|:.
Mouse   263 ---------------PQRQSLY-------------------------RASLREMDSLVG-QIKDK 286

  Fly   261 EAAGVADQTLVIYTSDNGP------------PF-------PGG---RTNLYEHGIRSPLIISSPN 303
            ......:.||:.:|.||||            ||       .||   :...:|.|.|.|.:...|.
Mouse   287 VDHVARENTLLWFTGDNGPWAQKCELAGSVGPFFGLWQTHQGGSPTKQTTWEGGHRVPALAYWPG 351

  Fly   304 KEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESDSVFGSHSYHE 368
            :...:..:| |::|||||:|:|:.......|.:.|..||.:            |:.:||......
Mouse   352 RVPANVTST-ALLSLLDIFPTVIALAGASLPPNRKFDGRDV------------SEVLFGKSQMGH 403

  Fly   369 VTMAYP----------MRMVRNRRYK------------------------LIHNINYWAD--FPI 397
            ..:.:|          ::.||...||                        ||.|:...||  .|:
Mouse   404 RVLFHPNSGAAGEYGALQTVRLNHYKAFYITGGAKACDGSVGPEQHHVAPLIFNLEDAADEGMPL 468

  Fly   398 DQDFYTSPTFQQILNATLR 416
            .:.   ||.:|::|....|
Mouse   469 QKG---SPEYQEVLQQVTR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 116/521 (22%)
SGSH 22..471 CDD:293751 114/515 (22%)
ArsgNP_001348904.1 ARSG 35..469 CDD:293780 110/497 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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