DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and Sulf2

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001239508.1 Gene:Sulf2 / 72043 MGIID:1919293 Length:908 Species:Mus musculus


Alignment Length:578 Identity:120/578 - (20%)
Similarity:199/578 - (34%) Gaps:217/578 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WIFT---LWLIAGCSA---GPQ--------------NVLLLLADDAGFESGA--YLNKFCQTPNL 48
            |:.:   |.|:||.||   .|:              |::|:|.||...|.|:  .:||   |..:
Mouse    42 WLLSTALLSLLAGSSAFLSHPRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNK---TRRI 103

  Fly    49 DALAKRGLLFNNAFTSVSSCSPSRSQLLTG--------------------QAGHSSGMYGLHQGV 93
              :.:.|..|.|||.:...|.||||.:|||                    ||.|.|..:.::...
Mouse   104 --MEQGGAHFINAFVTTPMCCPSRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNS 166

  Fly    94 HNFNVLPDTGSLPNLIRDQSGGRILSGIIGKKHVGAANNFRFDFEQT------EEQHSINQIGRN 152
            ..:.    |......:.:.:|..:..|  .|:.||...|.|| :..|      :|:|.       
Mouse   167 TGYR----TAFFGKYLNEYNGSYVPPG--WKEWVGLLKNSRF-YNYTLCRNGVKEKHG------- 217

  Fly   153 ITRMKEYARQFLKQA---------KDEKK-----PFFLMVGFHDPH---------------RCGH 188
                .:|:..:|...         :..||     |..:::....||               ...|
Mouse   218 ----SDYSTDYLTDLITNDSVSFFRTSKKMYPHRPVLMVISHAAPHGPEDSAPQYSRLFPNASQH 278

  Fly   189 ITPQFGEFCERWGSGEEGMGSIPD--W--------KPIYYDWRNLDVPAWLPDTDVVRQELAAQY 243
            |||.:            .....||  |        |||:.::.|:          :.|:.|    
Mouse   279 ITPSY------------NYAPNPDKHWIMRYTGPMKPIHMEFTNM----------LQRKRL---- 317

  Fly   244 MTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP-----PFPGGRTNLYEHGIRSPLIISSPN 303
            .|:..:|..:..:...|...|..|.|.::||:|:|.     ....|::..||..||.|..:..||
Mouse   318 QTLMSVDDSMETIYDMLVETGELDNTYILYTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPN 382

  Fly   304 KE----DRHHEATAAMVSLLDIYPSVMD--ALQIPRPNDTKIVGRSILPVLREEPPIKESDSVFG 362
            .|    :.|      :|..:|:.|:::|  .|.||...|    |:|||.:|..|.|:        
Mouse   383 VEAGSLNPH------IVLNIDLAPTILDIAGLDIPADMD----GKSILKLLDSERPV-------- 429

  Fly   363 SHSYHEVTMAYPMRMVRNRRYKLIHNINYWAD-FPIDQDFYTSPTFQQILNATLRKQTLPWYRSL 426
                              .|:.|...:..|.| |.:::.        ::|:.....:......:.
Mouse   430 ------------------NRFHLKKKLRVWRDSFLVERG--------KLLHKREGDKVNAQEENF 468

  Fly   427 LQYYQRPEWELYDIKTDPLERFNLADKAKYNGTLKQLREQLFDWQVATKDPWRCAPHA 484
            |..|||.:              :|..:|:|....:||.::           |:|...|
Mouse   469 LPKYQRVK--------------DLCQRAEYQTACEQLGQK-----------WQCVEDA 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 112/554 (20%)
SGSH 22..471 CDD:293751 109/527 (21%)
Sulf2NP_001239508.1 AslA 76..>420 CDD:225661 89/402 (22%)
G6S 76..418 CDD:293766 88/400 (22%)
DUF3740 573..699 CDD:289325
ALP_like <787..836 CDD:304875
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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