DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and si:dkey-174i8.1

DIOPT Version :10

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_021336461.2 Gene:si:dkey-174i8.1 / 563760 ZFINID:ZDB-GENE-160114-17 Length:562 Species:Danio rerio


Alignment Length:533 Identity:116/533 - (21%)
Similarity:206/533 - (38%) Gaps:168/533 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PQNVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGHSS 84
            |.:::.::.||.|:....|.....|||.||.||..|:...|.:.. ..||||||||:||:     
Zfish    29 PPHIVFVMVDDQGYNDIGYHGSEIQTPVLDQLAGEGVKLENYYVQ-PICSPSRSQLMTGR----- 87

  Fly    85 GMYGLHQGVHNFNVL--------PDTGSLPNLIRDQSGGRILSGIIGKKHVG--------AANNF 133
              |.:|.|:.:..:.        |||.:||.  |.|..| ..:.::||.|:|        .:..|
Zfish    88 --YQIHTGLQHSIIRARQPLCLPPDTPTLPE--RLQEAG-YSTHMVGKWHLGFCRPECLPTSRGF 147

  Fly   134 R------------FDFEQTE------------EQHSINQIGRNITRM-KEYARQFLKQAKDEKKP 173
            :            |.|:..:            ::.:....|...||: .|..:..|:: .|.:||
Zfish   148 QSFLGSLTGSGDHFSFQSCDGTEACGFDLHDGDRPAWELRGNYSTRLYTERVKDILRR-HDHRKP 211

  Fly   174 FFLMVGF---HDPHRC-GHITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNLDVPAWLPDTDV 234
            .||.|..   |.|.:. ||:..::           :.:|:.|                       
Zfish   212 LFLYVALQAVHTPLQAPGHLLRRY-----------QALGNRP----------------------- 242

  Fly   235 VRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP---------PFPGGRTNLYE 290
             |:..||.   :|.:|:.||.::.||...|..|.:::||:||||.         |..||:.:.:|
Zfish   243 -RRHYAAM---VSGVDESVGEIVSELRERGYYDNSVLIYSSDNGGQPLSGGCNWPLRGGKGSYWE 303

  Fly   291 HGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIK 355
            .|:|:...:.||..: |....:.|::.:.|.||:::........:...:.|:.:...:..:.|..
Zfish   304 GGVRAVGFVHSPLLK-RKGVVSHALIHISDWYPTLLSLAGYRESDSNHLDGQDVWETISSDLPCP 367

  Fly   356 ESDSVFG----SHSYHEVTMAYPMRMVRNRRYKLIHNINYW----------ADFPI------DQD 400
            .::.:|.    |..:.::          |.:...::....|          .|:.:      |.|
Zfish   368 RTEILFNIDPVSRRHGDI----------NPKLLTLNGFGIWDTGVRAAIRAGDWKLLTGNIGDGD 422

  Fly   401 FYTSPTFQQILNATLRKQTLP-----WYRSLLQYYQRPE--WELYDIKTDPLERFNLADK----- 453
            ::.             .||:|     |.....:..||.:  | |::|..||.||.:||:.     
Zfish   423 WFP-------------PQTMPGGPQQWQGMEKRRDQRGKSVW-LFNITADPYERADLAEARPEVV 473

  Fly   454 -------AKYNGT 459
                   ::||.|
Zfish   474 KVLLTRLSEYNRT 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 SGSH 22..471 CDD:293751 115/531 (22%)
si:dkey-174i8.1XP_021336461.2 None

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