DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and Galns

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_057931.3 Gene:Galns / 50917 MGIID:1355303 Length:520 Species:Mus musculus


Alignment Length:516 Identity:119/516 - (23%)
Similarity:197/516 - (38%) Gaps:137/516 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QFLQWIFTLWLIAGCSAGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSV 65
            |.|..:..|.|:|..:..|.|::|||.||.|: :.|.......:|||||.:|..|:||.:.:::.
Mouse     9 QLLLVLSALGLLAAGAPQPPNIVLLLMDDMGWGDLGVNGEPSRETPNLDRMAAEGMLFPSFYSAN 73

  Fly    66 SSCSPSRSQLLTGQAGHSSGMYGLHQGVHN-------FNVLPDTGS-LPNLIRDQSGGRILSGII 122
            ..|||||:.||||:....:|.|..:....|       ...:|::.. ||.|:: ::|  ..:.|:
Mouse    74 PLCSPSRAALLTGRLPIRNGFYTTNAHARNAYTPQEIMGGIPNSEHLLPELLK-KAG--YTNKIV 135

  Fly   123 GKKHVGAANNFR-----FD---------FEQTEEQHSIN--------QIGR-------------- 151
            ||.|:|....|.     ||         |...:.:...|        .:||              
Mouse   136 GKWHLGHRPQFHPLKHGFDEWFGSPNCHFGPYDNKAKPNIPVYRDWEMVGRFYEEFPINRKTGEA 200

  Fly   152 NITRM-KEYARQFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKP 215
            |:|:: .:.|..|::.....:.||||.......|...:.:.||      .|:...|...      
Mouse   201 NLTQLYTQEALDFIQTQHARQSPFFLYWAIDATHAPVYASRQF------LGTSLRGRYG------ 253

  Fly   216 IYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP- 279
                             |.||:           :|..||.:|..|:..|::..|.|.:|||||. 
Mouse   254 -----------------DAVRE-----------IDDSVGKILSLLQNLGISKNTFVFFTSDNGAA 290

  Fly   280 ------------PFPGGRTNLYEHGIRSPLIISSPNKEDRHH----EATAAMVSLLDIYPSVMDA 328
                        ||..|:...:|.|:|.|.|...|.     |    :.:..:.|::|::.:.:..
Mouse   291 LISAPNEGGSNGPFLCGKQTTFEGGMREPAIAWWPG-----HIAAGQVSHQLGSIMDLFTTSLSL 350

  Fly   329 LQIPRPNDTKIVGRSILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYK--LIHNINY 391
            ..:..|:|..|.|..:||.:.:...:......:..::...||:.         :||  |....|.
Mouse   351 AGLKPPSDRVIDGLDLLPTMLKGQMMDRPIFYYRGNTLMAVTLG---------QYKAHLWTWTNS 406

  Fly   392 WADFPIDQDFYTSPTFQQILNATLRKQT-LPWYRSLLQYYQRPEWELYDIKTDPLERFNLA 451
            |.:|....||........:...|..:.| ||.              ::.:..||.|||.|:
Mouse   407 WEEFTQGTDFCPGQNVSGVTTHTQEEHTELPL--------------IFHLGRDPGERFPLS 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 114/501 (23%)
SGSH 22..471 CDD:293751 113/496 (23%)
GalnsNP_057931.3 Catalytic domain. /evidence=ECO:0000250 24..377 94/400 (24%)
GALNS 27..492 CDD:293776 114/498 (23%)
PRK13759 28..473 CDD:237491 113/497 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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