DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and ARSF

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_011543824.1 Gene:ARSF / 416 HGNCID:721 Length:607 Species:Homo sapiens


Alignment Length:628 Identity:144/628 - (22%)
Similarity:217/628 - (34%) Gaps:213/628 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGHSSG 85
            |::|::.||.|. :.|.|.|...:||::|.||:.|:......::.|.||||||..|||:....||
Human    48 NIVLIMVDDLGIGDLGCYGNDTMRTPHIDRLAREGVRLTQHISAASLCSPSRSAFLTGRYPIRSG 112

  Fly    86 MY--GLHQGVHNFNV---LP-DTGSLPNLIRDQSGGRILSGIIGKKHVGAANNFRFDFEQTEEQH 144
            |.  |..:.:.|..|   || :..:|..|::.|.   ..:|:|||.|.|...:.|.|    :..|
Human   113 MVSSGNRRVIQNLAVPAGLPLNETTLAALLKKQG---YSTGLIGKWHQGLNCDSRSD----QCHH 170

  Fly   145 SINQIGRNITRMKEYARQFLKQAKDEKKPFFLMVG-FHDPHR------------C------GHIT 190
            ..|           |...:.     ...||.|:.. :.||.|            |      ..:|
Human   171 PYN-----------YGFDYY-----YGMPFTLVDSCWPDPSRNTELAFESQLWLCVQLVAIAILT 219

  Fly   191 PQFGEFCERWGSGEEGMGSIPDW----------------------KPIYYD-------------- 219
            ..||:.        .|..|:| |                      .|:|:|              
Human   220 LTFGKL--------SGWVSVP-WLLIFSMILFIFLLGYAWFSSHTSPLYWDCLLMRGHEITEQPM 275

  Fly   220 ----------------------------WRNLDVPAWLPDTD----VVRQELAAQYMTISRLDQG 252
                                        :..|.|...||.||    ..:..|...  .:..:|..
Human   276 KAERAGSIMVKEAISFLERHSKETFLLFFSFLHVHTPLPTTDDFTGTSKHGLYGD--NVEEMDSM 338

  Fly   253 VGLMLKELEAAGVADQTLVIYTSDNGPPFP--------GGRTNLY---------EHGIRSPLIIS 300
            ||.:|..::..|:.:.|||.:|||:|....        ||...:|         |.|||.|.|:.
Human   339 VGKILDAIDDFGLRNNTLVYFTSDHGGHLEARRGHAQLGGWNGIYKGGKGMGGWEGGIRVPGIVR 403

  Fly   301 SPNKEDRHH---EATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESDSVFG 362
            .|.|.....   |.|    ||:||.|:|........|.|..|.||.::|:|:            |
Human   404 WPGKVPAGRLIKEPT----SLMDILPTVASVSGGSLPQDRVIDGRDLMPLLQ------------G 452

  Fly   363 S--HSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPIDQD------FYTSPTFQQILNATLRKQT 419
            :  ||.||....|        ....:|.:.:   .|.|..      .|.:|.||...:......:
Human   453 NVRHSEHEFLFHY--------CGSYLHAVRW---IPKDDSGSVWKAHYVTPVFQPPASGGCYVTS 506

  Fly   420 L-PWYRSLLQYYQRPEWELYDIKTDPLERFNLADKA---------KYNGTLKQLREQL--FDWQV 472
            | ..:...:.|:..|  .|:|:..||.|...|....         |....||:.:|.:  ..:|:
Human   507 LCRCFGEQVTYHNPP--LLFDLSRDPSESTPLTPATEPLHDFVIKKVANALKEHQETIVPVTYQL 569

  Fly   473 ATKDPWR-----CAPHAVLQEQGVYKDQPVCLTLGHEALQRPK 510
            :..:..|     |.        ||:   |.||....|.:.:|:
Human   570 SELNQGRTWLKPCC--------GVF---PFCLCDKEEEVSQPR 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 135/587 (23%)
SGSH 22..471 CDD:293751 134/582 (23%)
ARSFXP_011543824.1 AslA 44..560 CDD:225661 133/574 (23%)
ALP_like 46..570 CDD:304875 135/584 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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