DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and ARSD

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001660.2 Gene:ARSD / 414 HGNCID:717 Length:593 Species:Homo sapiens


Alignment Length:615 Identity:138/615 - (22%)
Similarity:209/615 - (33%) Gaps:175/615 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IFTLWLIAGC-----SAGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSV 65
            :|...|:..|     :|...|:||::|||.|. :.|.|.|...:|||:|.||:.|:.......:.
Human    22 LFLCLLLKTCEPKTANAFKPNILLIMADDLGTGDLGCYGNNTLRTPNIDQLAEEGVRLTQHLAAA 86

  Fly    66 SSCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNVLPDTGSLPNLIRDQSGGRIL------SGIIGK 124
            ..|:|||:..|||:....||| ....|.........:|.||.  .:.:..|||      :|:|||
Human    87 PLCTPSRAAFLTGRHSFRSGM-DASNGYRALQWNAGSGGLPE--NETTFARILQQHGYATGLIGK 148

  Fly   125 KHVGAANNFRFDFEQTEEQHSINQIGRNITRMKEYARQF-LKQAKDEKKP--------------- 173
            .|.|.....|.|.......|..:..         |...| |....|..:|               
Human   149 WHQGVNCASRGDHCHHPLNHGFDYF---------YGMPFTLTNDCDPGRPPEVDAALRAQLWGYT 204

  Fly   174 FFLMVG---FHDPHRCGH-------ITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNLDV--- 225
            .||.:|   ......||.       :|...|..|..:.|.....|.:..|..|.  .||.||   
Human   205 QFLALGILTLAAGQTCGFFSVSARAVTGMAGVGCLFFISWYSSFGFVRRWNCIL--MRNHDVTEQ 267

  Fly   226 PAWLPDTDVVRQELAAQYM--------------------------------------TISRLDQG 252
            |..|..|..:..:.|..|:                                      .:..:|..
Human   268 PMVLEKTASLMLKEAVSYIERHKHGPFLLFLSLLHVHIPLVTTSAFLGKSQHGLYGDNVEEMDWL 332

  Fly   253 VGLMLKELEAAGVADQTLVIYTSDNGPPFP--------GGRTNLY---------EHGIRSPLIIS 300
            :|.:|..:|..|:.:.|...:|||:|....        ||...:|         |.|||.|.|..
Human   333 IGKVLNAIEDNGLKNSTFTYFTSDHGGHLEARDGHSQLGGWNGIYKGGKGMGGWEGGIRVPGIFH 397

  Fly   301 SPNKEDRHHEATAAMV-----SLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESDSV 360
            .|.      ...|..|     ||:|::|:|:..:....|.|..|.|.|::|:|:...        
Human   398 WPG------VLPAGRVIGEPTSLMDVFPTVVQLVGGEVPQDRVIDGHSLVPLLQGAE-------- 448

  Fly   361 FGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPIDQDFYTSPTFQ-QILNATLRKQTLPWYR 424
              :.|.||....|..:.:...|:....:.:.|      :..||:|.|. :...|...:...|...
Human   449 --ARSAHEFLFHYCGQHLHAARWHQKDSGSVW------KVHYTTPQFHPEGAGACYGRGVCPCSG 505

  Fly   425 SLLQYYQRPEWELYDIKTDPLERFNL----------------ADKAKYNGTLKQLREQLFDWQVA 473
            ..:.:::.|  .|:|:..||.|...|                |..:::..||..:.:|.....:.
Human   506 EGVTHHRPP--LLFDLSRDPSEARPLTPDSEPLYHAVIARVGAAVSEHRQTLSPVPQQFSMSNIL 568

  Fly   474 TKDPWRCAPHAVLQEQGVYKDQPVCLTLGH 503
            .| ||.               ||.|   ||
Human   569 WK-PWL---------------QPCC---GH 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 127/571 (22%)
SGSH 22..471 CDD:293751 126/561 (22%)
ARSDNP_001660.2 ALP_like 40..563 CDD:304875 126/560 (23%)
AslA 40..525 CDD:225661 120/522 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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