DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and STS

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001307679.1 Gene:STS / 412 HGNCID:11425 Length:590 Species:Homo sapiens


Alignment Length:609 Identity:145/609 - (23%)
Similarity:225/609 - (36%) Gaps:176/609 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IFTLWLIAGCSAGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSP 70
            :|.||.....:|...|::|::|||.|. :.|.|.||..:|||:|.||..|:.......:...|:|
Human    20 LFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTP 84

  Fly    71 SRSQLLTGQAGHSSGMYGLHQ-GVHNFNVLPDTGSLP-------NLIRDQSGGRILSGIIGKKHV 127
            ||:..:||:....|||....: ||..|..  .:|.||       .|::||.   ..:.:|||.|:
Human    85 SRAAFMTGRYPVRSGMASWSRTGVFLFTA--SSGGLPTDEITFAKLLKDQG---YSTALIGKWHL 144

  Fly   128 GAANNFRFDFEQTEEQHSINQI-GRNITRMKE--------YARQFLKQAKDEKKPFFL---MVG- 179
            |.:.:.:.||......|..|.. |.::|.:::        :...|       |:..||   :|| 
Human   145 GMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGF-------KRLVFLPLQIVGV 202

  Fly   180 -------------FHDP--------HRCGHITPQFGEFCERWGSGEEGMGSIPDWKPI-YYDWRN 222
                         .|.|        .....|...|             :|.:..::|: .:..||
Human   203 TLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLF-------------LGFLHYFRPLNCFMMRN 254

  Fly   223 LDVPAWLPDTDVVRQEL---AAQYM--------------------------------------TI 246
            .::.......|.:.|.|   |||::                                      .:
Human   255 YEIIQQPMSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAV 319

  Fly   247 SRLDQGVGLMLKELEAAGVADQTLVIYTSDNGPP-----------------FPGGRTNLYEHGIR 294
            ..:|..||.:|..|:...:|:.||:.:|||.|..                 :.||:.|.:|.|||
Human   320 EEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIR 384

  Fly   295 SPLIISSP------NKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPP 353
            .|.|:..|      .|.|   |.|:.|    ||:|:|......|.|.|..|.||.::|:|  |..
Human   385 VPGILRWPRVIQAGQKID---EPTSNM----DIFPTVAKLAGAPLPEDRIIDGRDLMPLL--EGK 440

  Fly   354 IKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPIDQDFYTSPTFQQI-LNATLRK 417
            .:.||        ||....|....:...|:...::.:.|..|     |:| |.|..: .|.....
Human   441 SQRSD--------HEFLFHYCNAYLNAVRWHPQNSTSIWKAF-----FFT-PNFNPVGSNGCFAT 491

  Fly   418 QTLPWYRSLLQYYQRPEWELYDIKTDPLERFNL--ADKAKYNGTLKQLRE-------------QL 467
            .....:.|.:.::..|  .|:||..||.||..|  |.:.::...||.::|             ..
Human   492 HVCFCFGSYVTHHDPP--LLFDISKDPRERNPLTPASEPRFYEILKVMQEAADRHTQTLPEVPDQ 554

  Fly   468 FDWQVATKDPW--RCAPHAVLQEQ 489
            |.|......||  .|.|...|..|
Human   555 FSWNNFLWKPWLQLCCPSTGLSCQ 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 136/582 (23%)
SGSH 22..471 CDD:293751 134/572 (23%)
STSNP_001307679.1 AslA 30..555 CDD:225661 134/574 (23%)
ES 33..557 CDD:293778 134/573 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.