DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and CG32187

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_730303.1 Gene:CG32187 / 39980 FlyBaseID:FBgn0052187 Length:409 Species:Drosophila melanogaster


Alignment Length:140 Identity:36/140 - (25%)
Similarity:50/140 - (35%) Gaps:38/140 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 YTSPTFQQILNATL-------------RKQTLPWYRSLLQYYQRPEWELYDIKTDPLERFNLADK 453
            |.||..|.:::..|             ||..|||  :|.|...|..|...   :|..|.|     
  Fly   128 YPSPPAQTMVSLALWKLSTDEHFEEIARKFRLPW--ALCQQVVRAFWHCI---SDNYESF----- 182

  Fly   454 AKYNGTLKQLREQLFDWQVATKDPWRCAPH----AVLQEQGVY-----KDQPVCLTLGHEALQRP 509
            .|:..:|...|..|..:|  ..|..||...    ..|:...|:     .|.||.|.|    :...
  Fly   183 IKWPNSLAAQRSTLQGYQ--RLDKLRCFRELFGIITLRRLDVFLESEHADVPVVLQL----ICNA 241

  Fly   510 KRRILGQYEE 519
            :|:|:..|.|
  Fly   242 ERKIVDCYVE 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 22/86 (26%)
SGSH 22..471 CDD:293751 21/81 (26%)
CG32187NP_730303.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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