DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and sulf2a

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_005169326.1 Gene:sulf2a / 393910 ZFINID:ZDB-GENE-040426-759 Length:874 Species:Danio rerio


Alignment Length:632 Identity:142/632 - (22%)
Similarity:225/632 - (35%) Gaps:224/632 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NVLLLLADDAGFESGAY--LNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGH-- 82
            |::|:|.||...|.|:.  :||   |..:  :.:.|..|:|||.:...|.||||.:|||:..|  
Zfish    47 NMILILTDDQDIELGSMQAMNK---TKRI--MMQGGTHFSNAFATTPMCCPSRSTILTGKYVHNH 106

  Fly    83 ---------SSGMYGLHQGVHNFNV-LPDTG----SLPNLIRDQSGGRILSGIIGKKHVGAANNF 133
                     ||..:..|...|.|.| |.::|    .....:.:.:|..:..|  .::.|....|.
Zfish   107 HTYTNNENCSSPSWQAHHEPHTFAVHLNNSGYRTAFFGKYLNEYNGSYVPPG--WREWVALVKNS 169

  Fly   134 RFDFEQTEEQHSINQIGRNITRMK---EYARQFLKQA-KDEKKPFFLMVGFHDPHR--------- 185
            || :..|        :.||..|.|   :|.:.:|... .::...:|.|.....|||         
Zfish   170 RF-YNYT--------LCRNGIREKHGTQYPKDYLTDVITNDSINYFRMSKRMYPHRPVMMVLSHA 225

  Fly   186 -------------------CGHITPQFGEFCERWGSGEEGMGSIPD--W--------KPIYYDWR 221
                               ..||||.:..            ...||  |        ||::..:.
Zfish   226 APHGPEDAAPQYSSAFPNASQHITPSYNH------------APNPDKHWILRYTGPMKPVHMQFT 278

  Fly   222 NLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP-----PF 281
            |:          :.|:.|    .|:..:|..|..:...|...|..|.|.:||.||:|.     ..
Zfish   279 NM----------LQRRRL----QTLLSVDDSVEKVYNMLVETGELDNTYIIYMSDHGYHIGQFGL 329

  Fly   282 PGGRTNLYEHGIRSPLIISSPNKE----DRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGR 342
            ..|::..||..||.|..:..||.|    :.|      :|...|:.|:::|...|..|.|  :.|:
Zfish   330 VKGKSMPYEFDIRIPFYVRGPNVEAGAINPH------IVLNTDLAPTLLDMAGIDIPQD--MDGK 386

  Fly   343 SILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWAD-FPIDQDFYTSPT 406
            |||.:|..|.|:   :|....|||.:..:.....:|  .|.|.:|.:   || ..::|:  :.|.
Zfish   387 SILKLLETERPV---NSFTRFHSYKKAKLWRDSFLV--ERGKPLHKL---ADGKEVEQN--SLPK 441

  Fly   407 FQQILNATLRKQTLPWYRSLLQYYQRP------EWE----------LYDIK-------------- 441
            :|::.:...|.:           ||.|      :|:          ||..|              
Zfish   442 YQRVRDLCQRAE-----------YQTPCEQPGQKWQCIEDGTGMPRLYKCKGMAGLFAPRALGLM 495

  Fly   442 ---------------------TDPLERFNLADKAKYNGTLKQLREQLFDWQVATKDPW-RCAPHA 484
                                 ..||:|       |...|.|:|:.:    :...::.| |..|:.
Zfish   496 AANRGQISAAHPGSDYCDCEPAAPLKR-------KKALTKKKLKNK----KSVPRNRWARSVPYH 549

  Fly   485 VLQEQGVYKDQPVCLTLGHEALQRP-----------KRRILGQYEEY 520
            :  :..||       ||..|...||           |:.:.||.|||
Zfish   550 L--DSNVY-------TLDLEKGYRPLNLNTSLMLGRKQAVYGQNEEY 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 126/574 (22%)
SGSH 22..471 CDD:293751 126/569 (22%)
sulf2aXP_005169326.1 G6S 45..387 CDD:293766 92/389 (24%)
DUF3740 541..670 CDD:289325 16/56 (29%)
ALP_like <758..807 CDD:304875
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.