DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and GNS

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_002067.1 Gene:GNS / 2799 HGNCID:4422 Length:552 Species:Homo sapiens


Alignment Length:512 Identity:114/512 - (22%)
Similarity:205/512 - (40%) Gaps:117/512 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LWLIAGC------SAGPQ--NVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVS 66
            |.::.||      :||.:  ||:|||.||.....|. :....:|..|  :.:.|:.|::|:...:
Human    28 LLVLGGCLGVFGVAAGTRRPNVVLLLTDDQDEVLGG-MTPLKKTKAL--IGEMGMTFSSAYVPSA 89

  Fly    67 SCSPSRSQLLTGQAGHSSGMYGLHQGVHN----------FNVLPDTGSLPNLIRDQSG------G 115
            .|.|||:.:|||:..|:      |..|:|          :..:.:..:.|.::|...|      |
Human    90 LCCPSRASILTGKYPHN------HHVVNNTLEGNCSSKSWQKIQEPNTFPAILRSMCGYQTFFAG 148

  Fly   116 RIL-------SGIIGKKHVGAANNFRFDFEQTEEQH----SINQIGRNITRMKEYARQFLKQA-- 167
            :.|       :|  |.:||....::.:..|:..:.:    |||  |:.....:.|:..:|...  
Human   149 KYLNEYGAPDAG--GLEHVPLGWSYWYALEKNSKYYNYTLSIN--GKARKHGENYSVDYLTDVLA 209

  Fly   168 ---------KDEKKPFFLMVGFHDPHRCGHITPQFGE-----FCER------WGSGEEGMGSIPD 212
                     |...:|||:|:....||......||:.:     |..|      .|:.:.       
Human   210 NVSLDFLDYKSNFEPFFMMIATPAPHSPWTAAPQYQKAFQNVFAPRNKNFNIHGTNKH------- 267

  Fly   213 WKPIYYDW--RNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTS 275
                   |  |....|........:......::.|:..:|..|..::|.||..|..:.|.:.|||
Human   268 -------WLIRQAKTPMTNSSIQFLDNAFRKRWQTLLSVDDLVEKLVKRLEFTGELNNTYIFYTS 325

  Fly   276 DNGP-----PFPGGRTNLYEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIPRPN 335
            |||.     ..|..:..|||..|:.||::..|.  .:.::.:..:|:.:|:.|:::|...... |
Human   326 DNGYHTGQFSLPIDKRQLYEFDIKVPLLVRGPG--IKPNQTSKMLVANIDLGPTILDIAGYDL-N 387

  Fly   336 DTKIVGRSILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFP--ID 398
            .|::.|.|:||:||....:.....|...:......:..|...      .|...::..  ||  :.
Human   388 KTQMDGMSLLPILRGASNLTWRSDVLVEYQGEGRNVTDPTCP------SLSPGVSQC--FPDCVC 444

  Fly   399 QDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQRPEW----ELYDIKTDPLERFNLA 451
            :|.|.: |:     |.:|..:..|.   |||.:..:.    |:|::..||.:..|:|
Human   445 EDAYNN-TY-----ACVRTMSALWN---LQYCEFDDQEVFVEVYNLTADPDQITNIA 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 111/499 (22%)
SGSH 22..471 CDD:293751 109/492 (22%)
GNSNP_002067.1 G6S 46..495 CDD:293766 109/494 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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