DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and Sgsh

DIOPT Version :10

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:504 Identity:266/504 - (52%)
Similarity:338/504 - (67%) Gaps:20/504 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TLWLIAG-CSAGPQNVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSR 72
            |:.|:.| |.|..:||||::|||.|||||.|.|....||:||||::..|:|.|||||||||||||
Mouse    10 TILLVLGLCGAHSRNVLLIVADDGGFESGVYNNTAIATPHLDALSRHSLIFRNAFTSVSSCSPSR 74

  Fly    73 SQLLTGQAGHSSGMYGLHQGVHNFNVLPDTGSLPNLIRDQSGGRILSGIIGKKHVGAANNFRFDF 137
            :.||||...|.:|||||||.||:||......||| |:.:|:|.|  :|||||||||....:.|||
Mouse    75 ASLLTGLPQHQNGMYGLHQDVHHFNSFDKVQSLP-LLLNQAGVR--TGIIGKKHVGPETVYPFDF 136

  Fly   138 EQTEEQHSINQIGRNITRMKEYARQFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFGEFCERWGS 202
            ..|||..|:.|:||||||:|:..::|| |.:|: :||||.|.|||||||||..||:|.|||::|:
Mouse   137 AFTEENSSVMQVGRNITRIKQLVQKFL-QTQDD-RPFFLYVAFHDPHRCGHSQPQYGTFCEKFGN 199

  Fly   203 GEEGMGSIPDWKPIYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVAD 267
            ||.|||.||||.|..||.:::.||.::|||...|.:|||||.||.|:||||||:|:||..|||.:
Mouse   200 GESGMGYIPDWTPQIYDPQDVMVPYFVPDTPAARADLAAQYTTIGRMDQGVGLVLQELRGAGVLN 264

  Fly   268 QTLVIYTSDNGPPFPGGRTNLYEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIP 332
            .||:|:|||||.|||.||||||..|...||::|||....|..:.:.|.|||||:.|:::|...||
Mouse   265 DTLIIFTSDNGIPFPSGRTNLYWPGTAEPLLVSSPEHPQRWGQVSDAYVSLLDLTPTILDWFSIP 329

  Fly   333 RPN-------DTKIVGRSILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNIN 390
            .|:       ..::.|||:||.|..||...   :||.|.|:|||||:||||.|.::.::||||::
Mouse   330 YPSYAIFGSKTIQLTGRSLLPALEAEPLWA---TVFSSQSHHEVTMSYPMRSVYHQNFRLIHNLS 391

  Fly   391 YWADFPIDQDFYTSPTFQQILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTDPLERFNLADKAK 455
            :...||||||||.|||||.:||.|...:...||:.|.:||.|..||||||..||.|..|||....
Mouse   392 FKMPFPIDQDFYVSPTFQDLLNRTTTGRPTGWYKDLHRYYYRERWELYDISRDPRETRNLAADPD 456

  Fly   456 YNGTLKQLREQLFDWQVATKDPWRCAPHAVLQEQGVYKDQPVCLTLGHE 504
            ....|:.|:.||..||..|.|||.|||..||:|    |..|.|..|.:|
Mouse   457 LAQVLEMLKAQLVKWQWETHDPWVCAPDGVLEE----KLTPQCRPLHNE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 SGSH 22..471 CDD:293751 244/455 (54%)
SgshNP_061292.2 SGSH 24..472 CDD:293751 243/454 (54%)

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