DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and Arsb

DIOPT Version :10

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_254278.1 Gene:Arsb / 25227 RGDID:2158 Length:528 Species:Rattus norvegicus


Alignment Length:598 Identity:137/598 - (22%)
Similarity:210/598 - (35%) Gaps:226/598 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IFTLW-LIAGCSAGPQNVLLLLADDAGFESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSP 70
            :..|| ..|..:|.|.:|:.:||||.|:....:.....:||:|||||..|::.:|.:.. ..|:|
  Rat    25 LLLLWPARASDAAPPPHVVFVLADDLGWNDLGFHGSVIRTPHLDALAAGGVVLDNYYVQ-PLCTP 88

  Fly    71 SRSQLLTGQAGHSSGMYGLHQGVHNF-------NVLP-DTGSLPNLIRDQSGGRILSGIIGKKHV 127
            ||||||||:       |.:|.|:.::       |.:| |...||.|::|..   ..:.::||.|:
  Rat    89 SRSQLLTGR-------YQIHMGLQHYLIMTCQPNCVPLDEKLLPQLLKDAG---YATHMVGKWHL 143

  Fly   128 GAANN------------FRF-----DFEQTEEQHSINQIGRNITR-----------MKEY----- 159
            |....            |.:     |:...|....|..:  |.||           .|||     
  Rat   144 GMYRKECLPTRRGFDTYFGYLLGSEDYYTHEACAPIECL--NGTRCALDLRDGEEPAKEYTDIYS 206

  Fly   160 ARQFLKQA------KDEKKPFFLMVGF---HDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKP 215
            ...|.|:|      ...:||.||.:.|   |||                                
  Rat   207 TNIFTKRATTLIANHPPEKPLFLYLAFQSVHDP-------------------------------- 239

  Fly   216 IYYDWRNLDVP-AWLPDTDVVRQELAAQYM-TISRLDQGVGLMLKELEAAGVADQTLVIYTSDNG 278
                   |.|| .::...|.::.:....|. .:|.||:.||.:.|.|::.|:.:.|::|:::|||
  Rat   240 -------LQVPEEYMEPYDFIQDKHRRIYAGMVSLLDEAVGNVTKALKSRGLWNNTVLIFSTDNG 297

  Fly   279 P---------PFPGGRTNLYEHGIRSPLIISSP--------NKEDRH----------------H- 309
            .         |..|.:..|:|.|||....::||        ::|..|                | 
  Rat   298 GQTRSGGNNWPLRGRKGTLWEGGIRGAGFVASPLLKQKGVKSRELMHITDWLPTLVNLAGGSTHG 362

  Fly   310 ----------------EATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPIKESD 358
                            ..:..:..||:|.|...|.|..|        |::..|...:..|::.  
  Rat   363 TKPLDGFDVWETISEGSPSPRVELLLNIDPDFFDGLPCP--------GKNTTPEKNDSFPLEH-- 417

  Fly   359 SVFGSHSYHEVTMAYPMRMVRNRRYKLI---HNINYWADFPIDQDF-----YTSPTFQQILNATL 415
            |.|.: |.|        ..:|.:.:||:   ....||...|...:.     ..|||         
  Rat   418 SAFNT-SIH--------AGIRYKNWKLLTGYPGCGYWFPPPSQSNISEVPSVDSPT--------- 464

  Fly   416 RKQTLPWYRSLLQYYQRPEWELYDIKTDPLERF-----------NLADKAKYNGTLKQLREQLFD 469
              :||              | |:||..||.||.           ||..:.:|      ..|....
  Rat   465 --KTL--------------W-LFDINRDPEERHDVSREHPHIVQNLLSRLQY------YHEHSVP 506

  Fly   470 WQVATKDPWRCAP 482
            ......|| ||.|
  Rat   507 SYFPPLDP-RCDP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 SGSH 22..471 CDD:293751 127/569 (22%)
ArsbNP_254278.1 4-S 40..483 CDD:293753 123/539 (23%)

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