DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and ARSG

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_011522838.1 Gene:ARSG / 22901 HGNCID:24102 Length:552 Species:Homo sapiens


Alignment Length:644 Identity:139/644 - (21%)
Similarity:217/644 - (33%) Gaps:265/644 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WIFTLWLIAG-------------CSAG-----PQNVLLLLADDAGF-ESGAYLNKFCQTPNLDAL 51
            |:|...|:||             |.:|     ..|.:::||||.|: :.||...:...|.|||.:
Human     3 WLFLKVLLAGVSFSGFLYPLVDFCISGKTRGQKPNFVIILADDMGWGDLGANWAETKDTANLDKM 67

  Fly    52 AKRGLLFNNAFTSVSSCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNVLPDTGSLP------NLIR 110
            |..|:.|.:...:.|:|||||:.||||:.|..:|:      ..||.| ...|.||      ..:.
Human    68 ASEGMRFVDFHAAASTCSPSRASLLTGRLGLRNGV------TRNFAV-TSVGGLPLNETTLAEVL 125

  Fly   111 DQSGGRILSGIIGKKHVGAAN----NFR-FDF--------------------------------- 137
            .|:|  .::|||||.|:|...    ||| ||:                                 
Human   126 QQAG--YVTGIIGKWHLGHHGSYHPNFRGFDYYFGIPYSHDMGCTDTPGYNHPPCPACPQGDGPS 188

  Fly   138 ----------------------EQTEEQHSINQIGRNITRMKEYARQFLKQAKDEKKPFFLMVGF 180
                                  ||.....|:.|      :..|.|.||:::|....:||.|.|..
Human   189 RNLQRDCYTDVALPLYENLNIVEQPVNLSSLAQ------KYAEKATQFIQRASTSGRPFLLYVAL 247

  Fly   181 HDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNLDVPAWLPDTDVVRQELAAQYMT 245
            ...|....:|.               :.:.|..:.:|      ....|                 
Human   248 AHMHVPLPVTQ---------------LPAAPRGRSLY------GAGLW----------------- 274

  Fly   246 ISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP------------PFPG----------GRTNL 288
              .:|..|| .:|:.....|.:.|.:.:|.||||            ||.|          .:...
Human   275 --EMDSLVG-QIKDKVDHTVKENTFLWFTGDNGPWAQKCELAGSVGPFTGFWQTRQGGSPAKQTT 336

  Fly   289 YEHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVL--REE 351
            :|.|.|.|.:...|.:...:..:| |::|:|||:|:|:...|...|...:..|..:..||  |.:
Human   337 WEGGHRVPALAYWPGRVPVNVTST-ALLSVLDIFPTVVALAQASLPQGRRFDGVDVSEVLFGRSQ 400

  Fly   352 PPIKESDSVFGS---------------HSYHEVTMAYP----------MRMVRNRRYKLIHNINY 391
            |..:|.::..|.               |.:  :.:.:|          ::.||..|||.      
Human   401 PGHREEEAGGGKEAEGAQSPLCNALQMHGF--LVLFHPNSGAAGEFGALQTVRLERYKA------ 457

  Fly   392 WADFPIDQDFY-----------TSPTFQQILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTD-- 443
                     ||           |.|..|       .|..|                :::::.|  
Human   458 ---------FYITGGARACDGSTGPELQ-------HKFPL----------------IFNLEDDTA 490

  Fly   444 ---PLERFNLADKAKYNGTLKQLREQLFD--WQVA---------TKDPW---RCAPHAV 485
               ||||    ..|:|...|.::|:.|.|  ..:|         |:||.   .|.|:.:
Human   491 EAVPLER----GGAEYQAVLPEVRKVLADVLQDIANDNISSADYTQDPSVTPCCNPYQI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 129/606 (21%)
SGSH 22..471 CDD:293751 126/582 (22%)
ARSGXP_011522838.1 ARSG 35..496 CDD:293780 117/557 (21%)
AslA 35..457 CDD:225661 107/480 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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