DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and sul-3

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001360719.1 Gene:sul-3 / 183778 WormBaseID:WBGene00006310 Length:484 Species:Caenorhabditis elegans


Alignment Length:499 Identity:98/499 - (19%)
Similarity:176/499 - (35%) Gaps:166/499 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NVLLLLADDAGFESGAYLNKFCQTPNLDALA--KRGLLFNNAFTSVSSCSPSRSQLLTG----QA 80
            |||.::|||.||....:.:....||||..||  |...|.:|::.: ..|:|:||..:||    :.
 Worm    32 NVLFIMADDLGFSDVDWKDSTLHTPNLRHLAFHKNTALLSNSYVN-QLCTPTRSAFMTGYYPFRV 95

  Fly    81 GHSSGMYGLHQ---GVHNFNVLPDTGSLPNLIRDQSGGRILSGIIGKKHVG------AANNFRFD 136
            |..:|:: ||.   ||...        .|.|..:.......:.::||.|:|      ...|..||
 Worm    96 GTQNGVF-LHMEPAGVPTM--------FPFLSENMRQLDYSTYLVGKWHLGYCKKEFLPTNRGFD 151

  Fly   137 F------EQTEE-QHSINQIGRNITRMKE----------------------YARQFLKQA----- 167
            :      .||.. .||.:|..|.:.|:.:                      |:.......     
 Worm   152 YFYGFYGPQTGYFNHSADQYHRELKRVVKGLDLFEEVGSGKSVPDFSQNGVYSTDLFTDVAMSVL 216

  Fly   168 --KDEKKPFFLMVGFHDPHRCGHITPQFGEFCERWGSGEEGMGSIPDWKPIYYDWRNLDVPAWLP 230
              .:..||||:.:.:...|....:...|.::|.|                               
 Worm   217 DNHNNSKPFFMFLSYQAVHPPLQVPRSFDKYCTR------------------------------- 250

  Fly   231 DTDVVRQELAAQYM-TISRLDQGVGLMLKELEAAGVADQTLVIYTSDNG---------PPFPGGR 285
                |:......|. .::.:|..:|.:::.|:|:.:.:.|::::|||||         .|..|.:
 Worm   251 ----VKNRYRRIYCGMLTAMDFAIGRLVEYLKASNLYENTVIVFTSDNGGTANFGASNAPLRGEK 311

  Fly   286 TNLYEHG------IRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMD--ALQIPRPNDTKIVGR 342
            ..::|.|      :.||:.|......|       .|..::|.:.:::.  .|:|....|      
 Worm   312 DTIWEGGTKTTTFVHSPMYIEEGGTRD-------MMFHVVDWHATILSITGLEIDSYGD------ 363

  Fly   343 SILPVLREEPPIKESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPIDQDFYTSPTF 407
                               |.:.:..:....|    :.||::.::||:.......|.|      :
 Worm   364 -------------------GINQWEYLKTGRP----KFRRFQFVYNIDNHGSAIRDGD------Y 399

  Fly   408 QQILNATLRKQTLPWYRSLLQYYQRPEWELYDIKTDPLERFNLA 451
            :.|:....||.:....|:          .|:.|.|||.|..::|
 Worm   400 KLIVGNVDRKMSKDKNRT----------RLFRITTDPTESKDIA 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 98/499 (20%)
SGSH 22..471 CDD:293751 98/499 (20%)
sul-3NP_001360719.1 4-S 31..433 CDD:293753 97/497 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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