DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgsh and sul-2

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_505102.1 Gene:sul-2 / 179194 WormBaseID:WBGene00006309 Length:452 Species:Caenorhabditis elegans


Alignment Length:393 Identity:81/393 - (20%)
Similarity:137/393 - (34%) Gaps:145/393 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CSAGP-----QNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQ 74
            |:..|     .|:::|:.||.|: :..:|.:...:...:|.:|..|..|..|:::.|.|||||:.
 Worm    23 CTVQPPSPRHPNIVILMIDDLGYGDIASYGHPTQEYTQVDRMAAEGTRFTQAYSADSMCSPSRAG 87

  Fly    75 LLTGQAGHSSGMYGLHQGVHNFNVLPDTGSLPNL------IRDQSGGRILSGIIGKKHVGAANNF 133
            .:||:.....|:.|   |...| |..|.|.||..      :..::|  ..:|::||.|:|...|.
 Worm    88 FITGRLPIRLGIVG---GRRVF-VPYDIGGLPKSETTMAEMLQEAG--YATGMVGKWHLGINENN 146

  Fly   134 RFDFEQTEEQHSINQIGRNI----------TR------------------------MK-EYA--- 160
            ..|......:.....:|.|:          ||                        || |:.   
 Worm   147 ATDGAHLPSKRGFEYVGVNLPFTNVWQCDTTREFYDKGPDPSLCFLYDGDDIVQQPMKFEHMTEN 211

  Fly   161 -----RQFL--KQAKDE-KKPFFLMVGFHDPHRCGHITPQF-GEFCERW------------GSGE 204
                 ::||  :.|:|: ::|||....|...|.....:.:| |...|..            |..|
 Worm   212 LVGDWKRFLMTRLAQDQHERPFFFYFSFPQVHSTQFASKRFRGSSKEALRSDGIDISDELRGESE 276

  Fly   205 EGMGSIPDWKPIYY------------DWR----------------NLD-------------VPAW 228
            :..||:...:||.|            |::                |||             |...
 Worm   277 DVEGSLGKARPIIYYCNTHLMAIRMGDYKVHYKTSPIFFNNSVDPNLDYFCPNGKPKSDWYVSQV 341

  Fly   229 LPDT-----------DVVR--------------QELAAQYMTISRLDQGVGLMLKELEAAGVADQ 268
            .||.           |::|              ||:  ::..:.||.:....::|.....|..::
 Worm   342 CPDEHLQKHYPPLVFDLIRDPYEQYPLQNTVKSQEI--RFQAMQRLSEHKSSLVKVKNVLGSYNK 404

  Fly   269 TLV 271
            ||:
 Worm   405 TLI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 80/392 (20%)
SGSH 22..471 CDD:293751 79/382 (21%)
sul-2NP_505102.1 ALP_like 32..388 CDD:390042 75/363 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.