DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgsh and Sulf1

DIOPT Version :9

Sequence 1:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_008761708.1 Gene:Sulf1 / 171396 RGDID:708554 Length:1117 Species:Rattus norvegicus


Alignment Length:519 Identity:115/519 - (22%)
Similarity:191/519 - (36%) Gaps:159/519 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NVLLLLADDAGFESGA--YLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSRSQLLTGQAGHSS 84
            |::|:|.||...|.|:  .:||     ....:...|..|.|||.:...|.||||.:|||:..|:.
  Rat    44 NIILVLTDDQDVELGSLQVMNK-----TRKIMEHGGATFTNAFVTTPMCCPSRSSMLTGKYVHNH 103

  Fly    85 GMY------------GLHQ----GVHNFNVLPDTGSLPNLIRDQSGGRILSGIIGKKHVGAANNF 133
            .:|            .||:    .|:..|....|......:.:.:|..|..|  .::.:|...|.
  Rat   104 NVYTNNENCSSPSWQALHEPRTFAVYLNNTGYRTAFFGKYLNEYNGSYIPPG--WREWLGLIKNS 166

  Fly   134 RFDFEQT------EEQHSINQIGRNITRMKEYARQ-FLKQAKDEKKPFFLMVGFHDPHR-----C 186
            || :..|      :|:|..           :||:. |.....:|...:|.|.....|||     .
  Rat   167 RF-YNYTVCRNGIKEKHGF-----------DYAKDYFTDLITNESINYFKMSKRMYPHRPVMMVI 219

  Fly   187 GHITPQFGEFCERWGSGEEGMGSIPDWKPIY----------YDWR-NLD-----------VPAWL 229
            .|..|.          |.|  .|.|.:..:|          |::. |:|           :|..:
  Rat   220 SHAAPH----------GPE--DSAPQFSKLYPNASQHITPSYNYAPNMDKHWIMQYTGPMLPIHM 272

  Fly   230 PDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSDNGP-----PFPGGRTNLY 289
            ..|:|::::   :..|:..:|..|..:...|...|....|.:|||:|:|.     ....|::..|
  Rat   273 EFTNVLQRK---RLQTLMSVDDSVERLYNMLVETGELGNTYIIYTADHGYHIGQFGLVKGKSMPY 334

  Fly   290 EHGIRSPLIISSPNKEDRHHEATAAMVSLLDIYPSVMDALQIPRPNDTKIVGRSILPVLREEPPI 354
            :..||.|..|..|:.|.  ......:|..:|:.|:::|...:..|:|  :.|:|:|.:|..|.| 
  Rat   335 DFDIRVPFFIRGPSIEP--GSIVPQIVLNIDLAPTILDIAGLDTPSD--VDGKSVLKLLDLEKP- 394

  Fly   355 KESDSVFGSHSYHEVTMAYPMRMVRNRRYKLIHNINYWADFPIDQDFYTSPTFQQILNATLRKQT 419
                   |:            |...|::.|:      |.|           ||.......|||:.
  Rat   395 -------GN------------RFRTNKKAKI------WRD-----------TFLVERGKFLRKKE 423

  Fly   420 LPWYRSLLQYYQRPEWELYDIKTDPLERFNLADKAKYNGTLKQLREQLFDWQVATKDP---WRC 480
             ...:::.|....|::|  .:|       .|..:|:|              |.|.:.|   |:|
  Rat   424 -ESSKNIQQSNHLPKYE--RVK-------ELCQQARY--------------QTACEQPGQNWQC 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgshNP_650760.1 AslA 17..476 CDD:225661 112/510 (22%)
SGSH 22..471 CDD:293751 110/505 (22%)
Sulf1XP_008761708.1 G6S 42..384 CDD:293766 87/377 (23%)
DUF3740 534..675 CDD:403667
ALP_like <767..816 CDD:419962
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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