Sequence 1: | NP_524398.1 | Gene: | Rh2 / 42261 | FlyBaseID: | FBgn0003248 | Length: | 381 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001372054.1 | Gene: | OPN1SW / 611 | HGNCID: | 1012 | Length: | 345 | Species: | Homo sapiens |
Alignment Length: | 348 | Identity: | 88/348 - (25%) |
---|---|---|---|
Similarity: | 166/348 - (47%) | Gaps: | 50/348 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 VNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCM 106
Fly 107 -MASQSPVMI--INFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPM 168
Fly 169 TIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLITYSLFV--YY 231
Fly 232 TPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALTTISLWFMAW 296
Fly 297 TPYLVICYFGLFKID----GL-TPLTTIWGATFAKTSAVYNPIVYGISHPKYR-IVLKEKCPMCV 355
Fly 356 FGNTDEPKPDAPASDTETTSEAD 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rh2 | NP_524398.1 | 7tm_4 | 67..>237 | CDD:304433 | 51/174 (29%) |
7tm_1 | 74..336 | CDD:278431 | 75/271 (28%) | ||
OPN1SW | NP_001372054.1 | 7tmA_SWS1_opsin | 32..311 | CDD:320204 | 78/307 (25%) |
TM helix 1 | 34..58 | CDD:320204 | 4/27 (15%) | ||
TM helix 2 | 67..89 | CDD:320204 | 6/21 (29%) | ||
TM helix 3 | 105..127 | CDD:320204 | 5/21 (24%) | ||
TM helix 4 | 149..165 | CDD:320204 | 2/15 (13%) | ||
TM helix 5 | 195..218 | CDD:320204 | 9/22 (41%) | ||
TM helix 6 | 245..267 | CDD:320204 | 3/24 (13%) | ||
TM helix 7 | 279..304 | CDD:320204 | 10/25 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X120 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |