| Sequence 1: | NP_524398.1 | Gene: | Rh2 / 42261 | FlyBaseID: | FBgn0003248 | Length: | 381 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_000530.1 | Gene: | RHO / 6010 | HGNCID: | 10012 | Length: | 348 | Species: | Homo sapiens |
| Alignment Length: | 368 | Identity: | 96/368 - (26%) |
|---|---|---|---|
| Similarity: | 175/368 - (47%) | Gaps: | 34/368 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 17 GPRFQAQSSGNGSVLDNVLPDMAHLVNPY-WSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVY 80
Fly 81 IFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSI 145
Fly 146 WSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSID 210
Fly 211 YMTRM--WNPRSYLITYSLFVYYT-PLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSED 272
Fly 273 CDKSAEGKLAKVALTTISLWFMAWTPYLVICYFGLFKIDG--LTPLTTIWGATFAKTSAVYNPIV 335
Fly 336 YGISHPKYR-IVLKEKCPMCVFGNTDEPKPDAPASDTETTSEA 377 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rh2 | NP_524398.1 | 7tm_4 | 67..>237 | CDD:304433 | 54/172 (31%) |
| 7tm_1 | 74..336 | CDD:278431 | 77/266 (29%) | ||
| RHO | NP_000530.1 | Rhodopsin_N | 3..37 | CDD:313611 | 7/40 (18%) |
| 7tmA_MWS_opsin | 38..317 | CDD:381742 | 80/293 (27%) | ||
| TM helix 1 | 40..64 | CDD:381742 | 3/23 (13%) | ||
| TM helix 2 | 73..95 | CDD:381742 | 7/21 (33%) | ||
| TM helix 3 | 111..133 | CDD:381742 | 4/21 (19%) | ||
| 'Ionic lock' involved in activated form stabilization. /evidence=ECO:0000305|PubMed:26200343 | 134..136 | 0/1 (0%) | |||
| TM helix 4 | 155..171 | CDD:381742 | 5/15 (33%) | ||
| TM helix 5 | 201..224 | CDD:381742 | 7/23 (30%) | ||
| TM helix 6 | 251..273 | CDD:381742 | 3/21 (14%) | ||
| TM helix 7 | 285..310 | CDD:381742 | 10/24 (42%) | ||
| Interaction with SAG. /evidence=ECO:0000269|PubMed:26200343, ECO:0000269|PubMed:28753425 | 330..348 | 6/17 (35%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X120 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||