DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh2 and opn7a

DIOPT Version :9

Sequence 1:NP_524398.1 Gene:Rh2 / 42261 FlyBaseID:FBgn0003248 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001303877.1 Gene:opn7a / 570397 ZFINID:ZDB-GENE-140106-15 Length:455 Species:Danio rerio


Alignment Length:312 Identity:84/312 - (26%)
Similarity:145/312 - (46%) Gaps:27/312 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SRFAPMDPMMSKI-LGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ 110
            |.|....|:.:.| :|:......:.|.|||.:::|:....|.|..||...::|||.||..|..|.
Zfish     7 STFQSNIPVAADITVGIVYSLFGVCSLCGNSMLLYVSYKKKHLLKPAEFFIVNLAISDLGMTLSL 71

  Fly   111 SPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPMTIKTSIM 175
            .|:.:.:.....|:.|...|.|||.||.|||..|:.::.:::......:...::|...:.:...|
Zfish    72 YPLAVTSSIAHRWLYGRTVCVIYAFCGVLFGICSLTTLTILSTVCCLKVCYPLHGNRFSYEHGRM 136

  Fly   176 KILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWN-----PRSYLITYSLFVYYTPLF 235
            .|:..|..::.:...||..|..|.||...|||.||:   .|:     .|||.....:..|..|..
Zfish   137 LIVCAWAYSLVFACSPLAHWGQYGPEPYGTACCIDW---AWSNQNSVARSYTTVLFIACYLVPCV 198

  Fly   236 LICYSYWFIIAAVAAHEKAMRE----QAKKMNVKSLRSSEDCDKSAEGKLAKVALTTISLWFMAW 296
            :|..||..|:..|....:|:.:    |.:..|::::             :.|:::.....:|.||
Zfish   199 IIIISYTRILITVRESRRAVEQHVSAQTRMGNIQTI-------------IVKLSVAVCIGFFTAW 250

  Fly   297 TPYLVICYFGLF-KIDGLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVL 347
            :||.::..:..| ..|.:.|:.....|.|||:|.:|||::|.:..|.:|.:|
Zfish   251 SPYALVSMWAAFGHFDDIPPMAFAVPAMFAKSSTLYNPLIYLLLKPNFRHLL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh2NP_524398.1 7tm_4 67..>237 CDD:304433 50/174 (29%)
7tm_1 74..336 CDD:278431 73/271 (27%)
opn7aNP_001303877.1 7TM_GPCR_Srd 23..235 CDD:304638 58/227 (26%)
7tm_1 35..291 CDD:278431 73/271 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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