Protein Alignment Rh2 and opn5

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: NP_001186975.1
• Gene: opn5 / 564181
• ZFINID: ZDB-GENE-041001-179
• Length: 352
• Species: Danio rerio
• Alignment Length: 327
• Identity: 101/327 - (30%)
• Similarity: 157/327 - (48%)
• Gaps: 34/327 - (10%)

  Fly    53 DPMMSK-------ILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ 110
            ||..||       :...:.|.|.|:|..|||.|:|:....|:...|..::.||||..||.:..|.
Zfish    20 DPFASKLSKEADIVAAFYILVIGILSATGNGYVMYMTFKRKTKLKPPEIMTLNLAIFDFGISVSG 84

  Fly   111 SPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPMTIKTSIM 175
            .|..|::.:...|:.|...|..|...|..|||.|:.:|.:::||||..|.....||.:....:.:
Zfish    85 KPFFIVSSFSHRWLFGWQGCRYYGWAGFFFGCGSLITMTVVSFDRYLKICHLRYGTWLKRHHAFL 149

  Fly   176 KILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMW------NPRSYLITYSLFVYYTPL 234
            .::|||..|.||..||::||..|.||...|:|::|:    |      :.:|:::....|....|.
Zfish   150 SVVFIWAYAAFWATMPVVGWGNYAPEPFGTSCTLDW----WLTQASVSGQSFVMCMLFFCLIFPT 210

  Fly   235 FLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALTTISLWFMAWTPY 299
            .:|.:||..||..|       :..||:::....|:..  :.|.|.||.|||:...:.:.:||.||
Zfish   211 VIIVFSYVMIIFKV-------KSSAKEVSHFDTRNKN--NHSLEMKLTKVAMLICAGFLIAWIPY 266

  Fly   300 LVICYFGLFKIDGLTPL-TTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKC-PMCVFGNTDEP 362
            .|:.....|......|: .::.....||:||:||||:|.:      |..|:|| ..|.|....:.
Zfish   267 AVVSVMSAFGEPDSVPIPVSVVPTLLAKSSAMYNPIIYQV------IDCKKKCVKSCCFQAWRKK 325

  Fly   363 KP 364
            ||
Zfish   326 KP 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	90/294 (31%)
		TM helix 1	59..85	CDD:320207	9/25 (36%)
		TM helix 2	92..118	CDD:320207	9/25 (36%)
		TM helix 3	130..160	CDD:320207	12/29 (41%)
		TM helix 4	171..191	CDD:320207	6/19 (32%)
		TM helix 5	218..247	CDD:320207	8/28 (29%)
		TM helix 6	276..306	CDD:320207	12/29 (41%)
		TM helix 7	315..340	CDD:320207	10/25 (40%)
opn5	NP_001186975.1	7tmA_Opsin5_neuropsin	32..308	CDD:320202	89/294 (30%)
		TM helix 1	33..59	CDD:320202	9/25 (36%)
		TM helix 2	66..93	CDD:320202	9/26 (35%)
		TM helix 3	104..134	CDD:320202	12/29 (41%)
		TM helix 4	147..165	CDD:320202	6/17 (35%)
		TM helix 5	194..224	CDD:320202	8/29 (28%)
		TM helix 6	243..273	CDD:320202	12/29 (41%)
		TM helix 7	283..308	CDD:320202	9/30 (30%)