DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh2 and opn4xb

DIOPT Version :9

Sequence 1:NP_524398.1 Gene:Rh2 / 42261 FlyBaseID:FBgn0003248 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001245152.1 Gene:opn4xb / 563080 ZFINID:ZDB-GENE-070705-526 Length:460 Species:Danio rerio


Alignment Length:358 Identity:124/358 - (34%)
Similarity:185/358 - (51%) Gaps:42/358 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNL 99
            :||..|.                 |:....|.|..:...||.:|::.|...|.||:..|..::||
Zfish    13 VPDHVHY-----------------IIAFLILIIGTLGVSGNALVMFAFYSNKKLRSLPNYFIMNL 60

  Fly   100 AFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGIN 164
            |.|||.|..:|||:..||..|:.|:.|.|.|.|||.||:|||..|:.::..|:.|||.||.|.:.
Zfish    61 AVSDFLMAITQSPIFFINCLYKEWMFGELGCKIYAFCGALFGITSMINLLAISIDRYLVITKPLQ 125

  Fly   165 GTPMTIKTSI-MKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLITYSLF 228
            ......|... :.||.||:.::.|::.||||||:|:|||.:|:|:.||::.....:||.:....|
Zfish   126 TIQWNSKRRTGLAILCIWLYSLAWSLAPLIGWSSYIPEGLMTSCTWDYVSPSPANKSYTMMLCCF 190

  Fly   229 VYYTPLFLICYSYWFIIAAV--AAHEKAMREQAKKMNVK--SLRSSEDCDKSAEGKLAKVALTTI 289
            |::.||.:|.|.|.|:..:|  |:.:..|....|...||  |:||        |.||||:|...|
Zfish   191 VFFIPLSIILYCYLFMFLSVRQASRDLEMLSSQKSSFVKQQSMRS--------EWKLAKIAAVVI 247

  Fly   290 SLWFMAWTPY---LVICYFGLFKIDGLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKC 351
            .::.::|.||   .::.:.|  ..|.|||.:....|..||:||:|||.:|.|.|.|||..|.|:.
Zfish   248 VVYVLSWAPYACVTLVAWAG--HQDVLTPYSKTLPAVLAKSSAIYNPFIYAIIHNKYRATLAERV 310

  Fly   352 P--MCVF-----GNTDEPKPDAPASDTETTSEA 377
            |  .|:.     |.:.....||.|.|:..:.::
Zfish   311 PGLSCLSRSQKDGLSSSTNSDASAQDSSVSRQS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh2NP_524398.1 7tm_4 67..>237 CDD:304433 68/170 (40%)
7tm_1 74..336 CDD:278431 103/269 (38%)
opn4xbNP_001245152.1 7tm_4 26..>229 CDD:304433 77/202 (38%)
7tm_1 35..295 CDD:278431 103/269 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590463
Domainoid 1 1.000 192 1.000 Domainoid score I3159
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I3623
OMA 1 1.010 - - QHG48050
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 1 1.000 - - FOG0001799
OrthoInspector 1 1.000 - - mtm6356
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.910

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