Protein Alignment Rh2 and ninaE

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: NP_524407.1
• Gene: ninaE / 42367
• FlyBaseID: FBgn0002940
• Length: 373
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 256/368 - (69%)
• Similarity: 294/368 - (79%)
• Gaps: 3/368 - (0%)

  Fly    14 AHSGPRFQAQSSGNGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVV 78
            |..||.|...|  ||||:|.|.||||||::|||::|..|||:.:|||..:.:.|.:||.||||||
  Fly     9 AQLGPHFAPLS--NGSVVDKVTPDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVV 71

  Fly    79 VYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCV 143
            :|||..||||||||||||:|||.|||.:|.:.:|:|.||.|:|||||||:.||||||.||.|||.
  Fly    72 IYIFATTKSLRTPANLLVINLAISDFGIMITNTPMMGINLYFETWVLGPMMCDIYAGLGSAFGCS 136

  Fly   144 SIWSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACS 208
            ||||||||:.|||.|||||:.|.||||..::.||.:||.|:..|.:.|..|||.||||||||:|.
  Fly   137 SIWSMCMISLDRYQVIVKGMAGRPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCG 201

  Fly   209 IDYMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDC 273
            |||:.|.||||||||.||:||||.||||||||||||||||:|||||||||||||||||||||||.
  Fly   202 IDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDA 266

  Fly   274 DKSAEGKLAKVALTTISLWFMAWTPYLVICYFGLFKIDGLTPLTTIWGATFAKTSAVYNPIVYGI 338
            :||||||||||||.||:||||||||||||...||||.:|||||.|||||.|||::|.||||||||
  Fly   267 EKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLFKFEGLTPLNTIWGACFAKSAACYNPIVYGI 331

  Fly   339 SHPKYRIVLKEKCPMCVFGNTDEPKPDAPASDTETTSEADSKA 381
            ||||||:.||||||.||||..|:.| .:.|....|.|||:|||
  Fly   332 SHPKYRLALKEKCPCCVFGKVDDGK-SSDAQSQATASEAESKA 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	211/287 (74%)
		TM helix 1	59..85	CDD:320207	14/25 (56%)
		TM helix 2	92..118	CDD:320207	15/25 (60%)
		TM helix 3	130..160	CDD:320207	23/29 (79%)
		TM helix 4	171..191	CDD:320207	6/19 (32%)
		TM helix 5	218..247	CDD:320207	25/28 (89%)
		TM helix 6	276..306	CDD:320207	25/29 (86%)
		TM helix 7	315..340	CDD:320207	19/24 (79%)
ninaE	NP_524407.1	7tmA_photoreceptors_insect	52..340	CDD:320207	211/287 (74%)
		TM helix 1	52..78	CDD:320207	14/25 (56%)
		TM helix 2	85..111	CDD:320207	15/25 (60%)
		TM helix 3	123..153	CDD:320207	23/29 (79%)
		TM helix 4	164..184	CDD:320207	6/19 (32%)
		TM helix 5	211..240	CDD:320207	25/28 (89%)
		TM helix 6	269..299	CDD:320207	25/29 (86%)
		TM helix 7	308..333	CDD:320207	19/24 (79%)