Protein Alignment Rh2 and Rh6

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: NP_524368.5
• Gene: Rh6 / 41889
• FlyBaseID: FBgn0019940
• Length: 363
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 196/368 - (53%)
• Similarity: 265/368 - (72%)
• Gaps: 9/368 - (2%)

  Fly    18 PRFQAQSSG-NGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIM-IISCCGNGVVVY 80
            |.|.....| |.|:.::|..::.|:|:|||.::.|::||...|:| |.:||: .:|..||.:|:|
  Fly     7 PSFAYMRDGRNLSLAESVPAEIMHMVDPYWYQWPPLEPMWFGIIG-FVIAILGTMSLAGNFIVMY 70

  Fly    81 IFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSI 145
            ||..:|.||||:|:.|:|||||||.||.:..|.:::|.:|.||::||..|::|...|||||||||
  Fly    71 IFTSSKGLRTPSNMFVVNLAFSDFMMMFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSI 135

  Fly   146 WSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSID 210
            |||.:||:|||.|||||:...|:|...::::::.:|.:...|.:|||.||:.||||||:|||..|
  Fly   136 WSMTLIAYDRYCVIVKGMARKPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTD 200

  Fly   211 YMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSE-DCD 274
            |..:.|..|||:|.|||:||.|||..|.:|||.|:.||||||||||||||||||.|||:|| |..
  Fly   201 YFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKS 265

  Fly   275 KSAEGKLAKVALTTISLWFMAWTPYLVICYFGLFKIDGLTPLTTIWGATFAKTSAVYNPIVYGIS 339
            |:.|.||||||||||||||.|||||.:|.|.|:|:...|:||:||.|:.|||.:||.||||||:|
  Fly   266 KAIEIKLAKVALTTISLWFFAWTPYTIINYAGIFESMHLSPLSTICGSVFAKANAVCNPIVYGLS 330

  Fly   340 HPKYRIVLKEKCPMCVFGNTDEPKPDAPASDTETTSE-ADSKA 381
            ||||:.||:||.| |:....|:...|   |.|:.|:| ::|:|
  Fly   331 HPKYKQVLREKMP-CLACGKDDLTSD---SRTQATAEISESQA 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	168/289 (58%)
		TM helix 1	59..85	CDD:320207	12/26 (46%)
		TM helix 2	92..118	CDD:320207	12/25 (48%)
		TM helix 3	130..160	CDD:320207	20/29 (69%)
		TM helix 4	171..191	CDD:320207	2/19 (11%)
		TM helix 5	218..247	CDD:320207	17/28 (61%)
		TM helix 6	276..306	CDD:320207	22/29 (76%)
		TM helix 7	315..340	CDD:320207	16/24 (67%)
Rh6	NP_524368.5	7tmA_photoreceptors_insect	48..338	CDD:320207	168/290 (58%)
		TM helix 1	49..75	CDD:320207	12/26 (46%)
		TM helix 2	82..108	CDD:320207	12/25 (48%)
		TM helix 3	120..150	CDD:320207	20/29 (69%)
		TM helix 4	161..181	CDD:320207	2/19 (11%)
		TM helix 5	208..237	CDD:320207	17/28 (61%)
		TM helix 6	267..297	CDD:320207	22/29 (76%)
		TM helix 7	306..331	CDD:320207	16/24 (67%)