Protein Alignment Rh2 and Lkr

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: NP_647968.3
• Gene: Lkr / 38622
• FlyBaseID: FBgn0035610
• Length: 542
• Species: Drosophila melanogaster
• Alignment Length: 329
• Identity: 72/329 - (21%)
• Similarity: 140/329 - (42%)
• Gaps: 62/329 - (18%)

  Fly    59 ILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSD-----FCMMASQSPVMIINF 118
            :|.:|...|.|::..||.:|:::...|:.:||..|:.:.||||:|     ||:     |......
  Fly    37 LLSIFYGGISIVAVIGNTLVIWVVATTRQMRTVTNMYIANLAFADVIIGLFCI-----PFQFQAA 96

  Fly   119 YYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILF--IW 181
            ..::|.|....|.......:|...||::::..||.||:..|:..:...|...   :.|.:.  ||
  Fly    97 LLQSWNLPWFMCSFCPFVQALSVNVSVFTLTAIAIDRHRAIINPLRARPTKF---VSKFIIGGIW 158

  Fly   182 MMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMW--NPRSYLIT------------------YS 226
            |:|:.:.|...|            |..::.:|..:  |..:|.:|                  |:
  Fly   159 MLALLFAVPFAI------------AFRVEELTERFRENNETYNVTRPFCMNKNLSDDQLQSFRYT 211

  Fly   227 L-FVYYTPLFLICYSYWFIIAAVAA-HEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALTTI 289
            | ||.|...|.: .|:.:|..||.. ..:|........::..|::.:        |:.|:.:..:
  Fly   212 LVFVQYLVPFCV-ISFVYIQMAVRLWGTRAPGNAQDSRDITLLKNKK--------KVIKMLIIVV 267

  Fly   290 SLWFMAWTPYLV--ICYFGLFKIDGLTPLTTIWGAT--FAKTSAVYNPIVYGISHPKYRIVLKEK 350
            .::.:.|.|..:  |.|..:.:|:....::.:|...  .|.:::.|||.:|||.:.|::....::
  Fly   268 IIFGLCWLPLQLYNILYVTIPEINDYHFISIVWFCCDWLAMSNSCYNPFIYGIYNEKFKREFNKR 332

  Fly   351 CPMC 354
            ...|
  Fly   333 FAAC 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	71/320 (22%)
		TM helix 1	59..85	CDD:320207	7/25 (28%)
		TM helix 2	92..118	CDD:320207	9/30 (30%)
		TM helix 3	130..160	CDD:320207	8/29 (28%)
		TM helix 4	171..191	CDD:320207	6/21 (29%)
		TM helix 5	218..247	CDD:320207	10/47 (21%)
		TM helix 6	276..306	CDD:320207	6/31 (19%)
		TM helix 7	315..340	CDD:320207	8/26 (31%)
Lkr	NP_647968.3	7tmA_leucokinin-like	36..329	CDD:320515	71/320 (22%)
		TM helix 1	37..63	CDD:320515	7/25 (28%)
		TM helix 2	70..95	CDD:320515	9/29 (31%)
		TM helix 3	108..138	CDD:320515	8/29 (28%)
		TM helix 4	149..170	CDD:320515	6/20 (30%)
		TM helix 5	205..234	CDD:320515	9/29 (31%)
		TM helix 6	254..284	CDD:320515	5/37 (14%)
		TM helix 7	297..322	CDD:320515	8/24 (33%)