DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh2 and opn4.1

DIOPT Version :9

Sequence 1:NP_524398.1 Gene:Rh2 / 42261 FlyBaseID:FBgn0003248 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_840074.2 Gene:opn4.1 / 352918 ZFINID:ZDB-GENE-030314-2 Length:500 Species:Danio rerio


Alignment Length:409 Identity:128/409 - (31%)
Similarity:192/409 - (46%) Gaps:100/409 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNL 99
            :||.||.                 |:|...|.:.|....||.:|||:|..:::|||..|:.::||
Zfish    59 VPDHAHY-----------------IIGSVILIVGITGVIGNALVVYVFCRSRTLRTAGNMFIVNL 106

  Fly   100 AFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGIN 164
            |.:||.|..:||||......:..||.|...|::||.||:|||..|:.::..||.||...|.:   
Zfish   107 AVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQ--- 168

  Fly   165 GTPMTIKTSIMK------ILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLI 223
              |:.:.:.:.:      ::.:|:.::.|::.|..|||||||||..|:||.||||...:.|:|.|
Zfish   169 --PLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMTFTPSVRAYTI 231

  Fly   224 TYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKS--------AEGK 280
            ...:||::.||.:|...|:.|...:.|..|.:||.             ||.::        .|.|
Zfish   232 LLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIREL-------------DCGETHKVYERMQNEWK 283

  Fly   281 LAKVALTTISLWFMAWTPYLVICYFGLFKIDG----LTPLTTIWGATFAKTSAVYNPIVYGISHP 341
            :|||||..|.|:.::|:||.|:   .|....|    |||......|..||.||::|||:|.|:||
Zfish   284 MAKVALVVIVLFIISWSPYSVV---ALTATAGYSHFLTPYMNSVPAVIAKASAIHNPIIYAITHP 345

  Fly   342 KYRIVL-------------KEKCPMCVF--GNTDEPKPD-------------------------- 365
            |||:.:             |||.....|  |:....:|.                          
Zfish   346 KYRVAIARYIPVLRPILRVKEKDLRSSFSSGSVSSRRPTLTSQCSLGVSMGNAARANGRWGKTRL 410

  Fly   366 APASDTE---TTSEADSKA 381
            :.|||::   |.||||..:
Zfish   411 SSASDSDSCWTESEADGSS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh2NP_524398.1 7tm_4 67..>237 CDD:304433 65/175 (37%)
7tm_1 74..336 CDD:278431 99/279 (35%)
opn4.1NP_840074.2 7tm_4 72..>284 CDD:304433 76/229 (33%)
7tm_1 81..340 CDD:278431 99/279 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..428 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590461
Domainoid 1 1.000 192 1.000 Domainoid score I3159
eggNOG 1 0.900 - - E33208_3BCHK
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 212 1.000 Inparanoid score I3623
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 1 1.000 - - FOG0001799
OrthoInspector 1 1.000 - - mtm6356
orthoMCL 1 0.900 - - OOG6_104608
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.700

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