Protein Alignment Rh2 and exorh

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: NP_571287.1
• Gene: exorh / 30459
• ZFINID: ZDB-GENE-991229-12
• Length: 354
• Species: Danio rerio
• Alignment Length: 377
• Identity: 97/377 - (25%)
• Similarity: 173/377 - (45%)
• Gaps: 55/377 - (14%)

  Fly    17 GPRFQAQSSGNGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIISCCGNGVVVYI 81
            ||.|....|....::.:...:..:.:...|........|:..|||.|.:         |.:.:|:
Zfish     6 GPNFYVPMSNRTGLVRSPFEEPQYYLAEPWQFSLLAAYMLFLILGSFPI---------NALTLYV 61

  Fly    82 FGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIW 146
            ....|.||||.|.::||||.:|..|:.....|.:....:..::||...|:|.....:|.|.:::|
Zfish    62 TVQHKKLRTPLNYILLNLAVADLFMVLGGFTVTLYTALHGYFLLGVTGCNIEGFFATLGGEIALW 126

  Fly   147 SMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDY 211
            |:.::|.:||.|:.|.::......|.:|:.:.|.|:||:...|.||:|||.|:|||...:|.|||
Zfish   127 SLVVLAIERYIVVCKPMSTFRFGEKHAIIGVGFTWVMALTCAVPPLLGWSRYIPEGMQCSCGIDY 191

  Fly   212 MTRMWNPR------SYLITYSLFVYYTPLFLI--CYSYWFIIAAVAAHEKAMREQAKKMNVKSLR 268
            .|    |:      |::|...:..:..||.:|  |||........||.::...|..::
Zfish   192 YT----PKPEVHNTSFVIYMFILHFSIPLLIIFFCYSRLLCTVRAAAAQQQESETTQR------- 245

  Fly   269 SSEDCDKSAEGKLAKVALTTISLWFMAWTPYLVICYFGLFKIDG--LTPLTTIWGATFAKTSAVY 331
                    ||.::.::.:..:..:.:.|.||..:.:: :|...|  ..|:.....|.|||::|:|
Zfish   246 --------AEREVTRMVVVMVIAFLVCWVPYASVAWY-IFANQGAEFGPVFMTVPAFFAKSAALY 301

  Fly   332 NPIVYGISHPKYRIVLKEKC---PMCVFGNTDEPKPDAPASDTETTSEADSK 380
            ||::|.:.:.::|     .|   .:|...|        |.::.|::|...||
Zfish   302 NPVIYIMLNRQFR-----NCMLSTVCCGKN--------PLAEDESSSAVSSK 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	83/297 (28%)
		TM helix 1	59..85	CDD:320207	6/25 (24%)
		TM helix 2	92..118	CDD:320207	8/25 (32%)
		TM helix 3	130..160	CDD:320207	10/29 (34%)
		TM helix 4	171..191	CDD:320207	7/19 (37%)
		TM helix 5	218..247	CDD:320207	9/36 (25%)
		TM helix 6	276..306	CDD:320207	5/29 (17%)
		TM helix 7	315..340	CDD:320207	10/24 (42%)
exorh	NP_571287.1	Rhodopsin_N	3..37	CDD:313611	5/30 (17%)
		7tmA_MWS_opsin	38..317	CDD:381742	84/312 (27%)
		TM helix 1	39..65	CDD:381742	7/34 (21%)
		TM helix 2	72..99	CDD:381742	8/26 (31%)
		TM helix 3	110..140	CDD:381742	10/29 (34%)
		TM helix 4	151..173	CDD:381742	8/21 (38%)
		TM helix 5	200..230	CDD:381742	8/29 (28%)
		TM helix 6	245..275	CDD:381742	5/45 (11%)
		TM helix 7	285..310	CDD:381742	10/24 (42%)