Protein Alignment Rh2 and LOC1276796

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: XP_556823.3
• Gene: LOC1276796 / 1276796
• VectorBaseID: AGAMI1_002859
• Length: 379
• Species: Anopheles gambiae
• Alignment Length: 384
• Identity: 145/384 - (37%)
• Similarity: 214/384 - (55%)
• Gaps: 21/384 - (5%)

  Fly     2 ERSHLPETPFDLAHSGPRFQAQSSGNGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGLFTLA 66
            :.::.||.......||.|:...         ||.|:....:..:|.:|...:..:..:|||..:|
Mosquito     9 QTAYRPEALIGADQSGLRYLGW---------NVPPEELVHIPEHWLQFPEPEASLHYLLGLLYIA 64

  Fly    67 IMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCD 131
            ..|.|..|||:|::||...||||||:|:.|:|||..||.||| ::|:.|.|.:.:.:.||.|.|.
Mosquito    65 FTIFSLVGNGLVIWIFIAAKSLRTPSNVFVINLAICDFFMMA-KTPIFIYNSFTKGFTLGNLGCQ 128

  Fly   132 IYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGTPMTIKTSIMKILFIWMMAVFWTVMPLIG-W 195
            |:...|||.|..:..:..:||:||||.|.:...|. :|...:|:.|..||...:.|.|:||:. |
Mosquito   129 IFGFVGSLTGIGAGATNALIAYDRYNTITRPFEGR-LTQTKAIIFICLIWAYTIPWGVLPLLEIW 192

  Fly   196 SAYVPEGNLTACSIDYMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAK 260
            ..|||||.||:|:.||::..::.|.::.:...|.|..|:.||.|.|..|::.|..|||::|||||
Mosquito   193 GRYVPEGFLTSCTFDYLSGTFDTRLFVASIFTFSYVLPMSLIIYYYSQIVSHVVNHEKSLREQAK 257

  Fly   261 KMNVKSLRSSED-CDKSAEGKLAKVALTTISLWFMAWTPYLVICYFGLFKIDG-LTPLTTIWGAT 323
            ||||:||||::: .|.|.|.::||.|:|...|:..:||||.|:...|.|.... |||..|::.|.
Mosquito   258 KMNVESLRSNQNQKDASVEIRIAKAAITVCFLFVASWTPYAVLALIGAFGDKSLLTPGVTMFPAC 322

  Fly   324 FAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVFGNTDEPKPDAPASDTET-TSEADSKA 381
            ..|..|..:|.||.||||:|||.|:::.|......|      .||.:..| |.:.|..|
Mosquito   323 ACKFVACLDPYVYAISHPRYRIELQKRLPWLAITET------LPAENASTCTEQQDGNA 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	126/290 (43%)
		TM helix 1	59..85	CDD:320207	12/25 (48%)
		TM helix 2	92..118	CDD:320207	12/25 (48%)
		TM helix 3	130..160	CDD:320207	12/29 (41%)
		TM helix 4	171..191	CDD:320207	6/19 (32%)
		TM helix 5	218..247	CDD:320207	9/28 (32%)
		TM helix 6	276..306	CDD:320207	12/29 (41%)
		TM helix 7	315..340	CDD:320207	9/24 (38%)
LOC1276796	XP_556823.3	7tmA_photoreceptors_insect	56..346	CDD:320207	126/291 (43%)
		TM helix 1	57..83	CDD:320207	12/25 (48%)
		TM helix 2	90..115	CDD:320207	12/25 (48%)
		TM helix 3	127..157	CDD:320207	12/29 (41%)
		TM helix 4	167..187	CDD:320207	6/19 (32%)
		TM helix 5	215..244	CDD:320207	9/28 (32%)
		TM helix 6	274..304	CDD:320207	12/29 (41%)
		TM helix 7	314..339	CDD:320207	9/24 (38%)