DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh2 and LOC1269684

DIOPT Version :10

Sequence 1:NP_524398.1 Gene:Rh2 / 42261 FlyBaseID:FBgn0003248 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_061501607.1 Gene:LOC1269684 / 1269684 VectorBaseID:AGAMI1_014185 Length:557 Species:Anopheles gambiae


Alignment Length:328 Identity:123/328 - (37%)
Similarity:182/328 - (55%) Gaps:24/328 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGL--FTLAIMIISCCGNGVVVYIFGGTKSLR 89
            :|.||. |.|.....:||:|.||.|  |...:..||  |...:|:....||.:||::|...:|||
Mosquito   131 SGYVLP-VDPLFVAKINPFWLRFDP--PSAGEHYGLAVFYFLMMLFGVIGNALVVFMFYRYRSLR 192

  Fly    90 TPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFD 154
            ||||.||:|||.:||.:| .::|:.|.|..::...||.:.|.:||..|::.|.|:|.::.:|:.|
Mosquito   193 TPANYLVINLAVADFIIM-MEAPMFIYNSIHQGPALGSIGCTVYALMGAVGGTVAIATLTVISID 256

  Fly   155 RYNVIVKGINGTPMTIKTS-IMKILFIWMMAVFWTVMPL--IGWSAYVPEGNLTACSIDYMTRMW 216
            ||||:|..:|....|.|.. ...|.|.|...:.:...|.  ||.|.|..||.|||||.||:.|.:
Mosquito   257 RYNVVVYPLNPNRSTTKLKCYFLIAFTWAYGLLFASFPALEIGLSRYTAEGYLTACSFDYLDRTY 321

  Fly   217 NPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKL 281
            ..|.::..|.:|.:..|..:|.|.|..|:.||             :|..:::||:..:|: |.||
Mosquito   322 KARVFMFVYFVFAWLIPFAIISYCYARILIAV-------------INANAIQSSKSKNKT-EVKL 372

  Fly   282 AKVALTTISLWFMAWTPYLVICYFGLFKIDG-LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRI 345
            |.|.:..|.|||.|||||.|:...|:|..:. ||||.::..|.|||.:|..:|..|.::||:||.
Mosquito   373 AGVVVGIIGLWFAAWTPYAVVAMMGVFGYEQYLTPLNSMIPAVFAKIAASIDPYFYAMNHPRYRQ 437

  Fly   346 VLK 348
            :|:
Mosquito   438 MLE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh2NP_524398.1 7tmA_photoreceptors_insect 59..347 CDD:320207 110/293 (38%)
TM helix 1 59..85 CDD:320207 9/27 (33%)
TM helix 2 92..118 CDD:320207 12/25 (48%)
TM helix 3 130..160 CDD:320207 13/29 (45%)
TM helix 4 171..191 CDD:320207 4/20 (20%)
TM helix 5 218..247 CDD:320207 8/28 (29%)
TM helix 6 276..306 CDD:320207 15/29 (52%)
TM helix 7 315..340 CDD:320207 9/24 (38%)
LOC1269684XP_061501607.1 None

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