Protein Alignment Rh2 and opn5

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: XP_002936036.1
• Gene: opn5 / 100497642
• XenbaseID: XB-GENE-1018909
• Length: 343
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 90/317 - (28%)
• Similarity: 152/317 - (47%)
• Gaps: 21/317 - (6%)

  Fly    44 PYWSRFAPMDPMMSKI-------LGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAF 101
            |::.|  ..||..||:       .|::.:||.|:|..|||.|:|:....|....||.::.:|||.
 Frog    15 PHYER--DSDPFASKLSREADIFAGVYLMAIGILSTLGNGYVIYMACSRKKKLRPAEIMTINLAV 77

  Fly   102 SDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGINGT 166
            .|..:..:..|..|::.:...||.|...|..|...|..|||.|:.::.:::.|||..|.....||
 Frog    78 CDLGISVTGKPFAIVSCFSHRWVFGWNACRWYGWAGFFFGCGSLITLTVVSLDRYLKICHLRYGT 142

  Fly   167 PMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLITYSL--FV 229
            .:..:.:.:.:..||..|..|..:||:|...|.||...|.|::|:.....:.:..:...|:  |.
 Frog   143 WLKRRHAFIALAVIWAYATLWATLPLVGVGNYAPEPFGTTCTLDWWLAQASVKGQIFVLSMLFFC 207

  Fly   230 YYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKSAEGKLAKVALTTISLWFM 294
            ...|..:|.:||..|||.|       :..||::.....|:..  :.:.|.||.|||:...:.:.:
 Frog   208 LLFPTMVIVFSYAKIIAKV-------KSSAKEVAHFDTRNQN--NHTLEIKLTKVAMLICAGFLI 263

  Fly   295 AWTPYLVICYFGLF-KIDGLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEK 350
            ||.||.|:..:..| :.|.:....::.....||::::||||:|.:...|.....|:|
 Frog   264 AWFPYAVVSVWSAFGQPDSIPIELSVVPTMMAKSASMYNPIIYQVIDCKPACCKKDK 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	82/297 (28%)
		TM helix 1	59..85	CDD:320207	10/32 (31%)
		TM helix 2	92..118	CDD:320207	7/25 (28%)
		TM helix 3	130..160	CDD:320207	10/29 (34%)
		TM helix 4	171..191	CDD:320207	4/19 (21%)
		TM helix 5	218..247	CDD:320207	8/30 (27%)
		TM helix 6	276..306	CDD:320207	11/29 (38%)
		TM helix 7	315..340	CDD:320207	7/24 (29%)
opn5	XP_002936036.1	7tmA_Opsin5_neuropsin	34..316	CDD:320202	82/290 (28%)
		TM helix 1	35..61	CDD:320202	10/25 (40%)
		TM helix 2	68..95	CDD:320202	7/26 (27%)
		TM helix 3	106..136	CDD:320202	10/29 (34%)
		TM helix 4	149..167	CDD:320202	4/17 (24%)
		TM helix 5	196..226	CDD:320202	9/29 (31%)
		TM helix 6	245..275	CDD:320202	11/29 (38%)
		TM helix 7	285..310	CDD:320202	7/24 (29%)