Protein Alignment Rh2 and opn3

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: XP_031750964.1
• Gene: opn3 / 100494279
• XenbaseID: XB-GENE-1018919
• Length: 367
• Species: Xenopus tropicalis
• Alignment Length: 355
• Identity: 85/355 - (23%)
• Similarity: 156/355 - (43%)
• Gaps: 62/355 - (17%)

  Fly    60 LGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWV 124
            |.|....:..:....|.:|:.::...|.|:||.|||..|.:...|..     .::.|.|.:.:.|
 Frog    10 LALIVATVGFLGLVNNLLVLILYCKFKRLQTPTNLLFFNTSLCHFVF-----SLLAITFTFMSCV 69

  Fly   125 LGPLW------CDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKG--INGTPMTIKTSIMKILFIW 181
            .|. |      |..:....:|.|.||..::.::|::||..:|.|  :|.:     .|...|.|:|
 Frog    70 RGS-WAFSVEMCVFHGFSKNLLGIVSFGTLTVVAYERYARVVYGKYVNSS-----WSKRSITFVW 128

  Fly   182 MMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIA 246
            :.::.||..|||||:.|..|.:...||.::........::::.:.|.....||.::.|.|.:|
 Frog   129 VYSLAWTGFPLIGWNLYTFETHKLDCSFEWTATDPKDTAFVLLFFLACITLPLSIMAYCYGYI-- 191

  Fly   247 AVAAHEKAMREQAKKMNVKSLRSSEDCD-KSAEGKLAKVALTTISLWFMAWTPYLVICYF---GL 307
                    :.|..|..:||::::.::.. ...|.|:||:.|..:..:.:.|.||.::...   |.
 Frog   192 --------LYEIQKLRSVKNIQNFQEITILDYEIKMAKMCLLMMLTFLIGWMPYTILSLLVTSGY 248

  Fly   308 FKIDGLTPLTTIWGATFAKTSAVYNPIVYGISHPKY---------------------RIVLKEKC 351
            .|.  :||..|:..:..|..||.|||:::..:..|:                     |:.:|:..
 Frog   249 SKF--ITPTITVMPSLLAIASAAYNPVIHIFTIKKFRQCLVQLLFHNFWRLLKNLNGRLAMKKVK 311

  Fly   352 PMCVFGNTDEPKPDA---PASD--TETTSE 376
            |:...|.:.. :|:.   .:||  |.|||:
 Frog   312 PVLGKGRSHN-RPEKKVFSSSDFFTRTTSD 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	75/319 (24%)
		TM helix 1	59..85	CDD:320207	4/24 (17%)
		TM helix 2	92..118	CDD:320207	6/25 (24%)
		TM helix 3	130..160	CDD:320207	8/29 (28%)
		TM helix 4	171..191	CDD:320207	6/19 (32%)
		TM helix 5	218..247	CDD:320207	6/28 (21%)
		TM helix 6	276..306	CDD:320207	8/32 (25%)
		TM helix 7	315..340	CDD:320207	8/24 (33%)
opn3	XP_031750964.1	7tm_GPCRs	8..286	CDD:475119	74/298 (25%)
		TM helix 1	10..34	CDD:320206	4/23 (17%)
		TM helix 2	43..65	CDD:320206	7/26 (27%)
		TM helix 3	81..103	CDD:320206	4/21 (19%)
		TM helix 4	122..138	CDD:320206	5/15 (33%)
		TM helix 5	166..189	CDD:320206	4/22 (18%)
		TM helix 6	220..242	CDD:320206	6/21 (29%)
		TM helix 7	254..279	CDD:320206	8/24 (33%)