Protein Alignment Rh2 and opn8

DIOPT Version :10

• Sequence 1: NP_524398.1
• Gene: Rh2 / 42261
• FlyBaseID: FBgn0003248
• Length: 381
• Species: Drosophila melanogaster
• Sequence 2: XP_004915005.1
• Gene: opn8 / 100493595
• XenbaseID: XB-GENE-983567
• Length: 353
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 86/317 - (27%)
• Similarity: 149/317 - (47%)
• Gaps: 39/317 - (12%)

  Fly    52 MDPMMSKILGLFTLAIMIISCCGN-GVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMI 115
            :.|::....|:|.|.:.|::..|| .|:......:..|:.| :||.:|||.:|..|..|..|:.|
 Frog     9 LHPLVDFGAGVFLLLVAILTVLGNCAVLATAVKCSSHLKAP-DLLSINLAVADLGMAISMYPLAI 72

  Fly   116 INFYYETWVLGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVK-GINGTPMTIKTSIMKILF 179
            .:.:...|:.|...|..||..|..||..|:.::.::|..||.|... ..:|..:..|...:.|:.
 Frog    73 ASAWNHAWLGGDASCLYYALMGFFFGVSSMMTLTVMAIIRYRVTSSFKYSGCTIEKKAVCILIMC 137

  Fly   180 IWMMAVFWTVMPLIGWSAYVPEGNLTACSIDYMTRMW-------NPRSYLITYSLFVYYTP--LF 235
            ||:.|:.|.|:||:||..|.||...|:|:|     .|       |..|::|:..:....:|  ..
 Frog   138 IWLYALLWAVLPLLGWGRYGPEPFGTSCTI-----AWGDFHHSSNGFSFIISMFILCTISPAVTI 197

  Fly   236 LICYS--YWFIIAAVAAHEKAMREQAKKMNVKSLRSSEDCDKS--AEGKLAKVALTTISLWFMAW 296
            ::|||  .|.:       .||.:|         :::.:....|  .|.||..:|:.....:.::|
 Frog   198 VVCYSGIAWKL-------HKAYQE---------IKNQDKIPNSTKVEKKLTLLAILVSFGFLISW 246

  Fly   297 TPYLVICYFGLFKIDG-LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKE-KC 351
            |||..:.::.||.... :.|:.::....|||:|..:||::|......:|..:|. ||
 Frog   247 TPYAAVSFWSLFHSSKYIPPVVSLLPCLFAKSSTAFNPMIYYAFSKTFRRKVKHLKC 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rh2	NP_524398.1	7tmA_photoreceptors_insect	59..347	CDD:320207	82/303 (27%)
		TM helix 1	59..85	CDD:320207	7/26 (27%)
		TM helix 2	92..118	CDD:320207	10/25 (40%)
		TM helix 3	130..160	CDD:320207	11/29 (38%)
		TM helix 4	171..191	CDD:320207	7/19 (37%)
		TM helix 5	218..247	CDD:320207	7/32 (22%)
		TM helix 6	276..306	CDD:320207	9/31 (29%)
		TM helix 7	315..340	CDD:320207	8/24 (33%)
opn8	XP_004915005.1	7tmA_Opsin5_neuropsin	17..298	CDD:320202	82/302 (27%)
		TM helix 1	17..42	CDD:320202	7/24 (29%)
		TM helix 2	49..76	CDD:320202	11/27 (41%)
		TM helix 3	87..117	CDD:320202	11/29 (38%)
		TM helix 4	131..149	CDD:320202	6/17 (35%)
		TM helix 5	178..208	CDD:320202	7/29 (24%)
		TM helix 6	226..256	CDD:320202	8/29 (28%)
		TM helix 7	266..291	CDD:320202	8/24 (33%)