DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh2 and opn4

DIOPT Version :9

Sequence 1:NP_524398.1 Gene:Rh2 / 42261 FlyBaseID:FBgn0003248 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_002937616.1 Gene:opn4 / 100491785 XenbaseID:XB-GENE-484582 Length:592 Species:Xenopus tropicalis


Alignment Length:415 Identity:131/415 - (31%)
Similarity:209/415 - (50%) Gaps:78/415 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ETP-FDLAHSGPRFQAQSSGNGSVLDNVLPDMAHLVNPYWSRFAPMDPMMSKILGLFTLAIMIIS 71
            ||| :::.|..|...             :||..|.|                 :|...||:.|..
 Frog    49 ETPQYEIHHVYPTVD-------------VPDHVHYV-----------------VGAVILAVGITG 83

  Fly    72 CCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQSPVMIINFYYETWVLGPLWCDIYAGC 136
            ..||.:|:|.|..::|||:|||:.::|||.:||.|..:|:||......::.|:.|...|::||.|
 Frog    84 MLGNFLVIYAFCRSRSLRSPANMFIINLAITDFLMSVTQAPVFFATSLHKRWIFGEKGCELYAFC 148

  Fly   137 GSLFGCVSIWSMCMIAFDRYNVIVKGINGT-PMTIKTSIMKILFIWMMAVFWTVMPLIGWSAYVP 200
            |:|||..|:.::.:||.|||.||.:.:... .|:.|.:::.:..:|:.::.|::.|..|||||||
 Frog   149 GALFGITSMITLMVIALDRYFVITRPLTSIGVMSKKRAVLILSGVWLYSLAWSLPPFFGWSAYVP 213

  Fly   201 EGNLTACSIDYMTRMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKMNVK 265
            ||.||:|:.||||...:.|:|.:....||::.|||:|.|.|.||..|:....:|:::.....|.:
 Frog   214 EGLLTSCTWDYMTFTPSVRAYTMLLFCFVFFIPLFIIIYCYIFIFKAIKNTNRAVQKIGTDDNKE 278

  Fly   266 SLRSSEDCDKSAEGKLAKVALTTISLWFMAWTPY---LVICYFGLFKIDGLTPLTTIWGATFAKT 327
            |.:..:....  |.|:||:||..|.|:.::|:||   .::.:.|...:  |||......|..||.
 Frog   279 SHKQYQKMKN--EWKMAKIALIVILLYVVSWSPYSTVALVAFAGYASV--LTPYMNSVPAVIAKA 339

  Fly   328 SAVYNPIVYGISHPKYRIVLKEKCPMCV----------------------------------FGN 358
            ||::|||:|.|:|||||:.:.:..| |:                                  .|.
 Frog   340 SAIHNPIIYAITHPKYRMAIAKYIP-CLGSLLRVKRRDSRSYSSYPSSRRSTVTSHCSQSSDVGG 403

  Fly   359 TDEPKPDAPA-SDTE---TTSEADS 379
            ..:.|...|: ||:|   |.:||||
 Frog   404 HPKLKNHLPSVSDSESGWTDTEADS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh2NP_524398.1 7tm_4 67..>237 CDD:304433 67/170 (39%)
7tm_1 74..336 CDD:278431 98/265 (37%)
opn4XP_002937616.1 7tm_4 79..>245 CDD:304433 64/165 (39%)
7tm_1 86..348 CDD:278431 98/265 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 193 1.000 Domainoid score I3128
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69152
Inparanoid 1 1.050 210 1.000 Inparanoid score I3575
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 1 1.000 - - FOG0001799
OrthoInspector 1 1.000 - - mtm9343
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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