DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and htr1b

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001122181.1 Gene:htr1b / 561647 ZFINID:ZDB-GENE-081022-141 Length:380 Species:Danio rerio


Alignment Length:640 Identity:153/640 - (23%)
Similarity:240/640 - (37%) Gaps:269/640 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 AGFYNQSSA-----SGATSGNLTNPNHTEVHWDGRYPSGYTLTHIVIASIIVTILMIIIVVGNML 135
            :|::..:.|     :.:|..|:|....|:...:       :....|..|.::.::.:..::.|..
Zfish     4 SGYFKPTPAHFEVLNSSTGTNVTLTPKTDEKQE-------SFAFQVTLSSVLGLITLATILSNAF 61

  Fly   136 VIIAIATEKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCT 200
            ||..|:..:.|:...|:.||||||.|..:.:::||..:...:...|..|...|||..:.|:..||
Zfish    62 VIATISQSRKLQTPANFLIASLAVTDLLVSVLVMPICVLYTVTREWTLGQVICDIWLSSDITCCT 126

  Fly   201 ASIMNLCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPLLGWKVKMPEGPLPK 265
            |||::||:|:|||||:||.||:|.|.||.||||.|:...||::..|.:||....:||  .|.|..
Zfish   127 ASILHLCVIALDRYWAITDAVEYAKKRTQARAAGMVATAWIIAISISLPPFFWRQVK--AGELTT 189

  Fly   266 CELSED-IGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKK 329
            |.::.| |.|.:||..|:||||:.:::.:|.|||..|:   :|.:|:.|:|. .:::||...:..
Zfish   190 CSVNTDHIFYTIYSTFGAFYIPTLLLIALYGRIYVEAR---KRILKQSPKKP-GKRLTSAHLSTN 250

  Fly   330 GTIPMPSSSGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTV 394
            ....:.|:|     .||..||                      ||.||                 
Zfish   251 SPASVASTS-----PLHCGRQ----------------------DLCSD----------------- 271

  Fly   395 LAYANPNGAGTNSVTVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPVPPSMGSNSSIN 459
                                      ||                            |:||:    
Zfish   272 --------------------------SG----------------------------SLGSD---- 278

  Fly   460 VLNNNNGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSVGVDTDMVSEFD 524
                                                 |::||                       
Zfish   279 -------------------------------------NQIRV----------------------- 283

  Fly   525 PSSSDSGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQQQQQQQ 589
             :.|||.:                                                         
Zfish   284 -TVSDSLL--------------------------------------------------------- 290

  Fly   590 QQVVKSELEPAIPKTPKPRDPEKEKRRIARKKEKRATLILGLIMGSFIACWLPFFFLYILVPACS 654
                                   ||:||:..:|::||..||:|:|::|.||||||...:|:|.||
Zfish   291 -----------------------EKKRISAARERKATKTLGIILGAYIVCWLPFFIYTLLIPLCS 332

  Fly   655 SHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRILFKXCLAYVCCYR 709
            | |..|| .|....||||:||.:||.|||:.|.||::||.::     :::.||.|
Zfish   333 S-CFSPE-LFDFFTWLGYVNSLINPIIYTMSNDDFKKAFHKV-----ISFRCCRR 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 75/183 (41%)
7tm_4 133..>252 CDD:304433 52/118 (44%)
htr1bNP_001122181.1 7tm_1 59..358 CDD:278431 134/549 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 1 1.000 - - X366
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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