DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and Octbeta3R

DIOPT Version :10

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001034048.2 Gene:Octbeta3R / 3885573 FlyBaseID:FBgn0250910 Length:1256 Species:Drosophila melanogaster


Alignment Length:1255 Identity:234/1255 - (18%)
Similarity:358/1255 - (28%) Gaps:586/1255 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SRLNANINTGNISTDDFLAVFSTGKPDNATLNPPLLSVDGQLTLPPGSGYVNVNDTIFFLNGSFY 68
            |.|.....||:|||.  .|..:|..|.:              :||..|.:|:.:.|...|..:..
  Fly    38 SHLQPATLTGHISTT--AAAKTTTTPTS--------------SLPITSQFVDASLTSLSLTATSS 86

  Fly    69 NSSLQLAAGFYNQSSASG---ATSGNLTNPNHTEVHWDGR---YPSGYTLTHIVIASIIVTILMI 127
            ::|.......|..|.::.   :|.|.....|.:::..|.:   ..|...|:.:::...|.:.:::
  Fly    87 DASYSSPFSSYLSSDSTFELLSTVGPNITANGSDIAVDNQAELEESWLDLSLLLLKGFIFSSIIL 151

  Fly   128 IIVVGNMLVIIAIATEKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELM-GYWIFGSWWCDIH 191
            ..|:||.||||::...:.|:.|.|:|:.|||:||..:.|..|.|:.:.||. |.|:||.:.|:::
  Fly   152 AAVLGNALVIISVQRNRKLRVITNYFVVSLAMADMLVALCAMTFNASVELSGGKWMFGPFMCNVY 216

  Fly   192 SAMDVLLCTASIMNLCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPL-LGW- 254
            :::||...||||::||.||:|||::|.:.::|..:.|......|:..|||:.|||...|: ||| 
  Fly   217 NSLDVYFSTASILHLCCISVDRYYAIVRPLEYPLNMTHKTVCFMLANVWILPALISFTPIFLGWY 281

  Fly   255 -------KVKM-PEGPLPKCELSEDIGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGI-- 309
                   ::.: |:    :|....:..|.|.|:..||:||..:|:.:|.|| |....|.|:.:  
  Fly   282 TTEEHLREISLHPD----QCSFVVNKAYALISSSVSFWIPGIVMLVMYWRI-FKEAIRQRKALSR 341

  Fly   310 ----------------------------------------------------------------- 309
                                                                             
  Fly   342 TSSNILLNSVHMGHTQQPTSLSYLHPSDCDLNATSAREETHSALSNLEDMLQPATDEDDDRDECD 406

  Fly   310 ----------------------------------------------------------------- 309
                                                                             
  Fly   407 ELRVPSPPPRRLSRSSIDLRDLEQERYEKVTHTDSAPSMMALQQQQPSHNQLQPPAPVFNPQIWT 471

  Fly   310 -----------KKHPRKTNNEQVTSFTTAKKGTIPMPSSS------------------------- 338
                       |:|......:|..|.|:....:.|.|.|:                         
  Fly   472 EGKMIPSKELDKEHSHPNGPQQQLSLTSGSGNSEPEPESTAYRVFGGLNSDESEGNDLYDTHLPL 536

  Fly   339 ----------------------------------------------------------------- 338
                                                                             
  Fly   537 AEDNKELKRLIEDNYLYFKRQTGGTIISGPGGGKYAALSETDFIRLKAGAAACGRKAFASSDSEF 601

  Fly   339 --------------------GVSALQL------------------HQ------------------ 347
                                |.:.|.|                  ||                  
  Fly   602 LRTISESRALPEQPVPGKEKGFNILSLLSKTKRSSTECFTLEKKRHQANSEGSSFFRRSRNRKLS 666

  Fly   348 -----------------QRQIATIETPPNSASLPMQI--------PTVTMDLASDISTSEAGELE 387
                             |||.:..::.||...:.:.|        .:|....:..:...:..||:
  Fly   667 HSYNGCGGGKERKLERRQRQHSDTDSTPNKPDILLDINVLSEQSGASVIQQFSDGVQLIDFSELK 731

  Fly   388 A--------------------------------------------VAAQTVLA---------YAN 399
            .                                            :|:.:.||         ...
  Fly   732 TPPERIRSDDELAQLADCFGESPQQPATPPPSLSPPELPEPSGLLIASSSELAEIFRSLSFPLGR 796

  Fly   400 PNGA--------------------GTNSVTVVSSGNGG----------------------PGASG 422
            |.||                    .|.:...:|..|||                      |..:.
  Fly   797 PAGAPQRLSTLSDQVCANYLMSPPNTPAPPAISVPNGGAMDSSASSNAQSASINVYFLSPPPHAA 861

  Fly   423 VPPSSPKETLQVSTIATGRVGLNVPVP---PSMGSNSSIN-----VLNNNNGTVA---------- 469
            .|..:|.:|..||......:.:.||||   |.|.|.|:|:     :|::....|.          
  Fly   862 APGYTPSDTSTVSLDVVTSLPMPVPVPQPNPQMASQSNISPKPEIILDSTLSPVEGCGDEHRDVT 926

  Fly   470 --------MDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAG-------RCRALSVGVDTDM 519
                    ..|.|..:..|||.|    ||:...||.:.|.|.:||       |.|..||......
  Fly   927 SPLFKRKDSAGDADVSVSGNGGA----GGVGGVGGRQGRCSILAGYDGIQTVRKRQASVVTYDVN 987

  Fly   520 VSEFDPSSSDS----------------------------GV------------------VSRCAV 538
            |..|...:|||                            |:                  ::..||
  Fly   988 VINFSQENSDSRSYIPMGRVSTSSAKHEFSNKSSLIRRGGICIFVDEEEAEIIEQRPRGITFAAV 1052

  Fly   539 VKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSS-----GVASKNQQQQQQQQQQQVVKSELE 598
            ..||.  .| |:.|...|:.........|..|..|:     ..:||....:|.....|      .
  Fly  1053 PSPLP--KC-PLCGADISSTTGTTANATATANADSTIDTTVTTSSKRSIHEQTPDLGQ------R 1108

  Fly   599 PAIPK-------------TPKPRDPEKEKRRIAR------------------KKEKRATLILGLI 632
            ||...             |...:..:..|||...                  |.|.:|...||:|
  Fly  1109 PASSSSSTRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATGGSVRPAKGWKAEHKAARTLGII 1173

  Fly   633 MGSFIACWLPFFFLYILVPACSSHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRIL 697
            ||.|:.||||||..|::...|...|..|:....|.||:||.||.|||.||..||:|||.|||..|
  Fly  1174 MGVFLLCWLPFFLWYVITSLCGPACPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAFRNTL 1238

  Fly   698 FKXCLAYVCCYRCVYASIEK 717
                       .||...:||
  Fly  1239 -----------ECVLPCLEK 1247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tmA_alpha2_AR 132..>307 CDD:320187 67/185 (36%)
TM helix 2 150..176 CDD:320187 10/25 (40%)
TM helix 3 188..218 CDD:320187 14/29 (48%)
TM helix 4 230..253 CDD:320187 8/23 (35%)
TM helix 5 271..300 CDD:320187 11/28 (39%)
7tm_GPCRs <616..693 CDD:475119 37/94 (39%)
TM helix 6 626..648 CDD:410628 12/21 (57%)
TM helix 7 661..686 CDD:410628 12/24 (50%)
Octbeta3RNP_001034048.2 7tmA_DmOct-betaAR-like 142..>338 CDD:320194 70/200 (35%)
TM helix 1 142..167 CDD:320194 8/24 (33%)
TM helix 2 174..200 CDD:320194 10/25 (40%)
TM helix 3 213..243 CDD:320194 14/29 (48%)
TM helix 4 255..278 CDD:320194 8/22 (36%)
TM helix 5 302..331 CDD:320194 12/29 (41%)
7tm_GPCRs <1161..1234 CDD:475119 36/72 (50%)
TM helix 6 1167..1189 CDD:410628 12/21 (57%)
TM helix 7 1202..1227 CDD:410628 12/24 (50%)

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