DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and HTR1D

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_000855.1 Gene:HTR1D / 3352 HGNCID:5289 Length:377 Species:Homo sapiens


Alignment Length:623 Identity:149/623 - (23%)
Similarity:223/623 - (35%) Gaps:261/623 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NQSSASG---ATSGNLTNPNHTEVHWDGRYPSGYTLTHIVIA-SIIVTILMIIIVVGNMLVIIAI 140
            || ||.|   ..|....|...|...||.|     ||..:.|: :::::::.:..|:.|..|:..|
Human     5 NQ-SAEGLPQEASNRSLNATETSEAWDPR-----TLQALKISLAVVLSVITLATVLSNAFVLTTI 63

  Fly   141 ATEKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMN 205
            ...:.|....|:.|.|||..|..:.:::||.|:|..:...|.||...|||..:.|:..|||||::
Human    64 LLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILH 128

  Fly   206 LCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPLLGWKVKMPEGPLPKCEL-S 269
            ||:|:|||||:||.|::|.|.||...||.||..||.:|..|.||||. |:....:..:..|.: :
Human   129 LCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLF-WRQAKAQEEMSDCLVNT 192

  Fly   270 EDIGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKKGTIPM 334
            ..|.|.:||..|:|||||.:::.:|.|||.||:.|...                           
Human   193 SQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRILN--------------------------- 230

  Fly   335 PSSSGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTVLAYAN 399
                                                                             
Human   231 ----------------------------------------------------------------- 230

  Fly   400 PNGAGTNSVTVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPVPPSMGSNSSINVLNNN 464
                                    |||...:....:.:.||..|            ||:..||::
Human   231 ------------------------PPSLYGKRFTTAHLITGSAG------------SSLCSLNSS 259

  Fly   465 NGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSVGVDTDMVSEFDPSSSD 529
                ..:|.:.:||                                                   
Human   260 ----LHEGHSHSAG--------------------------------------------------- 269

  Fly   530 SGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQQQQQQQQQVVK 594
                      .||.|                 |..|.                            
Human   270 ----------SPLFF-----------------NHVKI---------------------------- 279

  Fly   595 SELEPAIPKTPKPRDPEKEKRRIARKKEKRATLILGLIMGSFIACWLPFFFLYILVPACSSHCNI 659
                       |..|...|::||:..:|::||.|||:|:|:||.||||||.:.:::|.|...|.|
Human   280 -----------KLADSALERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWI 333

  Fly   660 PESAFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRIL 697
            ..:.|....||||:||.:||.|||:||::||:||::|:
Human   334 HPALFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKIV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 72/183 (39%)
7tm_4 133..>252 CDD:304433 52/118 (44%)
HTR1DNP_000855.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/18 (39%)
7tmA_5-HT1B_1D 35..367 CDD:320455 133/581 (23%)
TM helix 1 40..66 CDD:320455 4/25 (16%)
TM helix 2 73..99 CDD:320455 10/25 (40%)
TM helix 3 111..141 CDD:320455 17/29 (59%)
Agonist binding. /evidence=ECO:0000250 114..123 1/8 (13%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 135..137 1/1 (100%)
TM helix 4 153..176 CDD:320455 12/23 (52%)
TM helix 5 194..223 CDD:320455 14/28 (50%)
TM helix 6 294..324 CDD:320455 16/29 (55%)
Agonist binding. /evidence=ECO:0000250 314..318 3/3 (100%)
TM helix 7 335..360 CDD:320455 12/24 (50%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 352..356 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 1 1.000 - - X366
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.940

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