DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and Adra2a

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_036871.3 Gene:Adra2a / 25083 RGDID:2056 Length:465 Species:Rattus norvegicus


Alignment Length:634 Identity:191/634 - (30%)
Similarity:260/634 - (41%) Gaps:195/634 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LAAGFYNQSSASGATSGNLTNPNHTEVHWDGRYPSGYTLTHIVIASIIVTILMIIIVVGNMLVII 138
            ||.|.:....:....:|| ::.|.||....|...:.|:|...:....:..:||:..|.||:||||
  Rat     8 LAEGSFAPMGSLQPDAGN-SSWNGTEAPGGGTRATPYSLQVTLTLVCLAGLLMLFTVFGNVLVII 71

  Fly   139 AIATEKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASI 203
            |:.|.::||..||.|:.|||.||..:..:::|||||||:||||.||..||:|:.|:|||.||:||
  Rat    72 AVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGKVWCEIYLALDVLFCTSSI 136

  Fly   204 MNLCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPLLGWKVKMPEG---PL-P 264
            ::||.||||||||||:|::|...|||.|...:|..||::||:|..|||:..:.|...|   |. |
  Rat   137 VHLCAISLDRYWSITQAIEYNLKRTPRRIKAIIVTVWVISAVISFPPLISIEKKGAGGGQQPAEP 201

  Fly   265 KCELSEDIGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKK 329
            .|::::...||:.|::|||:.|..||:.||:|||..||.|.|                       
  Rat   202 SCKINDQKWYVISSSIGSFFAPCLIMILVYVRIYQIAKRRTR----------------------- 243

  Fly   330 GTIPMPSSSGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTV 394
              :| ||..|..|           ...||..|.                                
  Rat   244 --VP-PSRRGPDA-----------CSAPPGGAD-------------------------------- 262

  Fly   395 LAYANPNGAGTNSVTVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPVPPSMG------ 453
               ..|||.|.      ..|.|..||...|         :.|...|..|...|..|..|      
  Rat   263 ---RRPNGLGP------ERGAGTAGAEAEP---------LPTQLNGAPGEPAPTRPRDGDALDLE 309

  Fly   454 SNSSINVLNNNNGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSVGVDTD 518
            .:||........|....:.|..|.|....|.|.....|.:.|..      .||            
  Rat   310 ESSSSEHAERPQGPGKPERGPRAKGKTKASQVKPGDSLPRRGPG------AAG------------ 356

  Fly   519 MVSEFDPSSSDSGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQ 583
                  |.:|.||                        ..::|...|||:                
  Rat   357 ------PGASGSG------------------------QGEERAGGAKAS---------------- 375

  Fly   584 QQQQQQQQVVKSELEPAIPKTPKPRDPEKEKRRIARKKEKRATLILGLIMGSFIACWLPFFFLYI 648
                                          :.|..:.:|||.|.:|.:::|.|:.||.||||.|.
  Rat   376 ------------------------------RWRGRQNREKRFTFVLAVVIGVFVVCWFPFFFTYT 410

  Fly   649 LVPACSSHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRIL 697
            |:   :..|.:|...|...||.||.||:|||.||||||.||||||::||
  Rat   411 LI---AVGCPVPYQLFNFFFWFGYCNSSLNPVIYTIFNHDFRRAFKKIL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 92/186 (49%)
7tm_4 133..>252 CDD:304433 67/118 (57%)
Adra2aNP_036871.3 7tmA_alpha2A_AR 49..452 CDD:320445 176/586 (30%)
TM helix 1 51..75 CDD:320445 10/23 (43%)
TM helix 2 84..106 CDD:320445 9/21 (43%)
TM helix 3 122..144 CDD:320445 12/21 (57%)
TM helix 4 167..183 CDD:320445 6/15 (40%)
TM helix 5 209..232 CDD:320445 10/22 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..377 44/315 (14%)
PRK07764 <243..>365 CDD:236090 40/256 (16%)
TM helix 6 388..410 CDD:320445 10/21 (48%)
TM helix 7 420..445 CDD:320445 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 276 1.000 Domainoid score I1673
eggNOG 1 0.900 - - E33208_3BC1G
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H47944
Inparanoid 1 1.050 316 1.000 Inparanoid score I2473
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323202at33208
OrthoFinder 1 1.000 - - FOG0001303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.970

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