DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and octr-1

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001024569.1 Gene:octr-1 / 184469 WormBaseID:WBGene00006411 Length:408 Species:Caenorhabditis elegans


Alignment Length:592 Identity:158/592 - (26%)
Similarity:240/592 - (40%) Gaps:226/592 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 IVIASIIVTILMIIIVVGNMLVIIAIATEKSLK-NIQNWFIASLAVADFFLGLIIMPFSLANELM 178
            :.|:|::.  :|::|:.||:||::.:..::.|: ..|||.|.||||||..:||::||.:|..|::
 Worm    23 LTISSMLT--VMLLIIFGNLLVVVTVYRDRKLRMQRQNWLIVSLAVADMLVGLLVMPLTLTYEIV 85

  Fly   179 GYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMS 243
            |.|..|:..|:|..|:|||..||||:::|.||||||:|:|..:.|..:|||.|..:.|...||:|
 Worm    86 GEWTMGNILCEIWLALDVLFVTASILHICAISLDRYFSVTSPLTYPATRTPLRMFIYIGVSWIVS 150

  Fly   244 ALICIPPLLGWKVKMPEGPLPKCELSEDIGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRG 308
            .|||:||:.||:.:..||   :|.:|.|:||||||:|||||||..|::.||.:||......:|:.
 Worm   151 LLICLPPIFGWRPERAEG---ECSVSTDLGYVLYSSLGSFYIPVVILIIVYAKIYSITIRHSRQR 212

  Fly   309 IKKHPRKTNNEQVTSFTTAKKGTIPMPSSSGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMD 373
            :|:..|:.:             |:.|                 .||.:                 
 Worm   213 LKETERRDH-------------TLNM-----------------LTIRS----------------- 230

  Fly   374 LASDISTSEAGELEAVAAQTVLAYANPNGAGTNSVTVVSSGNGGPGASGVPPSSPKETLQVSTIA 438
                 ||:|...:|....:.                                |.|.|. :...:.
 Worm   231 -----STNERYNMEYELEEN--------------------------------SDPIED-EKEKVV 257

  Fly   439 TGRVGLNVPVPPSMGSNSSINVLNNNNGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSP 503
            |.|                                                              
 Worm   258 TNR-------------------------------------------------------------- 260

  Fly   504 IAGRCRALSVGVDTDMVSEFDPSSSDSGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAK--- 565
                          ||::                       ::|..:  ||.|.:..|...|   
 Worm   261 --------------DMIN-----------------------KVCWQL--RKISEELPRQGVKVSI 286

  Fly   566 AAAKNQQSSGVASKNQQQQQQQQQQQVVKSELEPAIPKTPKPRDP---EKEKRRIARKKEKRATL 627
            |...|..|                        .||...|.|..:.   ||.||:: :.||::|||
 Worm   287 ALDTNHNS------------------------PPASDLTRKLEEKKFCEKRKRKL-KAKERQATL 326

  Fly   628 ILGLIMGSFIACWLPFFFLYILVPACSSHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDFRRA 692
            :||:|:.:||..|||||.:|::  ....| ..|...|...|||||.||.:||.|||:||::|:|.
 Worm   327 LLGIILSAFILSWLPFFLIYVI--GAFGH-EAPPLVFKFFFWLGYCNSGINPVIYTVFNREFKRG 388

  Fly   693 FRRILFK 699
            ..:.|.|
 Worm   389 LCKQLHK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 84/183 (46%)
7tm_4 133..>252 CDD:304433 56/119 (47%)
octr-1NP_001024569.1 7tmA_alpha2_AR 22..389 CDD:320187 156/584 (27%)
TM helix 1 24..48 CDD:320187 8/25 (32%)
TM helix 2 58..80 CDD:320187 13/21 (62%)
TM helix 3 96..118 CDD:320187 11/21 (52%)
TM helix 4 141..157 CDD:320187 7/15 (47%)
TM helix 5 176..199 CDD:320187 15/22 (68%)
TM helix 6 322..347 CDD:320187 13/24 (54%)
TM helix 7 357..382 CDD:320187 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167494
Domainoid 1 1.000 250 1.000 Domainoid score I1160
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H47944
Inparanoid 1 1.050 273 1.000 Inparanoid score I1810
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323202at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

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